Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLIC4Q9Y696 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLIC4Q9Y696 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.7■□□□□ 0.9
CLIC4Q9Y696 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLIC4Q9Y696 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLIC4Q9Y696 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
CLIC4Q9Y696 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.7■□□□□ 0.9
CLIC4Q9Y696 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
CLIC4Q9Y696 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLIC4Q9Y696 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.7■□□□□ 0.9
CLIC4Q9Y696 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.69■□□□□ 0.9
CLIC4Q9Y696 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLIC4Q9Y696 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLIC4Q9Y696 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.69■□□□□ 0.9
CLIC4Q9Y696 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLIC4Q9Y696 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.69■□□□□ 0.9
CLIC4Q9Y696 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.69■□□□□ 0.9
CLIC4Q9Y696 AC145285.6-201ENST00000604632 637 ntBASIC20.69■□□□□ 0.9
CLIC4Q9Y696 AC092865.7-201ENST00000641832 219 ntBASIC20.69■□□□□ 0.9
CLIC4Q9Y696 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CLIC4Q9Y696 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
CLIC4Q9Y696 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.69■□□□□ 0.9
CLIC4Q9Y696 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
CLIC4Q9Y696 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLIC4Q9Y696 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLIC4Q9Y696 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLIC4Q9Y696 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLIC4Q9Y696 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.69■□□□□ 0.9
CLIC4Q9Y696 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CLIC4Q9Y696 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLIC4Q9Y696 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.68■□□□□ 0.9
CLIC4Q9Y696 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLIC4Q9Y696 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLIC4Q9Y696 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLIC4Q9Y696 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CLIC4Q9Y696 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.68■□□□□ 0.9
CLIC4Q9Y696 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLIC4Q9Y696 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLIC4Q9Y696 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLIC4Q9Y696 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLIC4Q9Y696 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.68■□□□□ 0.9
CLIC4Q9Y696 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
CLIC4Q9Y696 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CLIC4Q9Y696 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLIC4Q9Y696 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLIC4Q9Y696 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.68■□□□□ 0.9
CLIC4Q9Y696 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLIC4Q9Y696 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CLIC4Q9Y696 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLIC4Q9Y696 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLIC4Q9Y696 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLIC4Q9Y696 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLIC4Q9Y696 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLIC4Q9Y696 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLIC4Q9Y696 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLIC4Q9Y696 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLIC4Q9Y696 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.68■□□□□ 0.9
CLIC4Q9Y696 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLIC4Q9Y696 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CLIC4Q9Y696 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLIC4Q9Y696 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.67■□□□□ 0.9
CLIC4Q9Y696 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLIC4Q9Y696 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLIC4Q9Y696 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLIC4Q9Y696 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.67■□□□□ 0.9
CLIC4Q9Y696 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.67■□□□□ 0.9
CLIC4Q9Y696 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLIC4Q9Y696 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLIC4Q9Y696 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLIC4Q9Y696 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.67■□□□□ 0.9
CLIC4Q9Y696 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CLIC4Q9Y696 PVRIG2P-201ENST00000435460 978 ntBASIC20.67■□□□□ 0.9
CLIC4Q9Y696 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.67■□□□□ 0.9
CLIC4Q9Y696 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CLIC4Q9Y696 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CLIC4Q9Y696 DUTP2-201ENST00000519164 463 ntBASIC20.67■□□□□ 0.9
CLIC4Q9Y696 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.67■□□□□ 0.9
CLIC4Q9Y696 AC010203.1-204ENST00000548782 407 ntBASIC20.67■□□□□ 0.9
CLIC4Q9Y696 AL023973.1-201ENST00000624619 620 ntBASIC20.67■□□□□ 0.9
CLIC4Q9Y696 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CLIC4Q9Y696 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLIC4Q9Y696 PP12613-201ENST00000424958 2230 ntBASIC20.67■□□□□ 0.9
CLIC4Q9Y696 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLIC4Q9Y696 LINC00167-201ENST00000530583 1419 ntBASIC20.67■□□□□ 0.9
CLIC4Q9Y696 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLIC4Q9Y696 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CLIC4Q9Y696 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLIC4Q9Y696 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLIC4Q9Y696 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.66■□□□□ 0.9
CLIC4Q9Y696 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CLIC4Q9Y696 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLIC4Q9Y696 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLIC4Q9Y696 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLIC4Q9Y696 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLIC4Q9Y696 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLIC4Q9Y696 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLIC4Q9Y696 SLC25A3P1-201ENST00000443844 931 ntBASIC20.66■□□□□ 0.9
CLIC4Q9Y696 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLIC4Q9Y696 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CLIC4Q9Y696 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms