Protein–RNA interactions for Protein: Q9Y620

RAD54B, DNA repair and recombination protein RAD54B, humanhuman

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD54BQ9Y620 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAD54BQ9Y620 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAD54BQ9Y620 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.81■□□□□ 0.6
RAD54BQ9Y620 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.81■□□□□ 0.6
RAD54BQ9Y620 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.81■□□□□ 0.6
RAD54BQ9Y620 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RAD54BQ9Y620 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAD54BQ9Y620 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAD54BQ9Y620 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
RAD54BQ9Y620 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.81■□□□□ 0.6
RAD54BQ9Y620 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAD54BQ9Y620 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAD54BQ9Y620 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
RAD54BQ9Y620 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RAD54BQ9Y620 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAD54BQ9Y620 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAD54BQ9Y620 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAD54BQ9Y620 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.81■□□□□ 0.6
RAD54BQ9Y620 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAD54BQ9Y620 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAD54BQ9Y620 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
RAD54BQ9Y620 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.81■□□□□ 0.6
RAD54BQ9Y620 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAD54BQ9Y620 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAD54BQ9Y620 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAD54BQ9Y620 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAD54BQ9Y620 KRT18P1-202ENST00000452408 1331 ntBASIC18.8■□□□□ 0.6
RAD54BQ9Y620 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAD54BQ9Y620 AC026471.1-201ENST00000564629 3026 ntBASIC18.8■□□□□ 0.6
RAD54BQ9Y620 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.8■□□□□ 0.6
RAD54BQ9Y620 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.8■□□□□ 0.6
RAD54BQ9Y620 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
RAD54BQ9Y620 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RAD54BQ9Y620 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAD54BQ9Y620 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAD54BQ9Y620 CHCHD2P8-201ENST00000429873 447 ntBASIC18.8■□□□□ 0.6
RAD54BQ9Y620 SLC25A6P5-201ENST00000435663 894 ntBASIC18.8■□□□□ 0.6
RAD54BQ9Y620 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAD54BQ9Y620 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.8■□□□□ 0.6
RAD54BQ9Y620 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.8■□□□□ 0.6
RAD54BQ9Y620 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.8■□□□□ 0.6
RAD54BQ9Y620 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.8■□□□□ 0.6
RAD54BQ9Y620 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
RAD54BQ9Y620 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RAD54BQ9Y620 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RAD54BQ9Y620 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.8■□□□□ 0.6
RAD54BQ9Y620 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.8■□□□□ 0.6
RAD54BQ9Y620 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAD54BQ9Y620 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAD54BQ9Y620 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAD54BQ9Y620 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAD54BQ9Y620 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAD54BQ9Y620 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAD54BQ9Y620 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.8■□□□□ 0.6
RAD54BQ9Y620 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAD54BQ9Y620 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAD54BQ9Y620 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAD54BQ9Y620 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAD54BQ9Y620 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAD54BQ9Y620 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAD54BQ9Y620 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAD54BQ9Y620 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RAD54BQ9Y620 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAD54BQ9Y620 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RAD54BQ9Y620 LETM1P2-201ENST00000597330 2178 ntBASIC18.79■□□□□ 0.6
RAD54BQ9Y620 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.79■□□□□ 0.6
RAD54BQ9Y620 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAD54BQ9Y620 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.79■□□□□ 0.6
RAD54BQ9Y620 PHGDH-209ENST00000641074 1780 ntBASIC18.79■□□□□ 0.6
RAD54BQ9Y620 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAD54BQ9Y620 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAD54BQ9Y620 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.79■□□□□ 0.6
RAD54BQ9Y620 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.79■□□□□ 0.6
RAD54BQ9Y620 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.79■□□□□ 0.6
RAD54BQ9Y620 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.79■□□□□ 0.6
RAD54BQ9Y620 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.79■□□□□ 0.6
RAD54BQ9Y620 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAD54BQ9Y620 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAD54BQ9Y620 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAD54BQ9Y620 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAD54BQ9Y620 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RAD54BQ9Y620 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAD54BQ9Y620 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.79■□□□□ 0.6
RAD54BQ9Y620 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAD54BQ9Y620 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.79■□□□□ 0.6
RAD54BQ9Y620 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RAD54BQ9Y620 FLJ13224-201ENST00000313737 1514 ntBASIC18.79■□□□□ 0.6
RAD54BQ9Y620 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.79■□□□□ 0.6
RAD54BQ9Y620 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAD54BQ9Y620 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAD54BQ9Y620 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RAD54BQ9Y620 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAD54BQ9Y620 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAD54BQ9Y620 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAD54BQ9Y620 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAD54BQ9Y620 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.78■□□□□ 0.6
RAD54BQ9Y620 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RAD54BQ9Y620 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.78■□□□□ 0.6
RAD54BQ9Y620 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RAD54BQ9Y620 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms