Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF11Q9Y3C5 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF11Q9Y3C5 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF11Q9Y3C5 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF11Q9Y3C5 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF11Q9Y3C5 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.69■□□□□ 0.42
RNF11Q9Y3C5 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF11Q9Y3C5 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF11Q9Y3C5 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF11Q9Y3C5 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
RNF11Q9Y3C5 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF11Q9Y3C5 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF11Q9Y3C5 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF11Q9Y3C5 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RNF11Q9Y3C5 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF11Q9Y3C5 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF11Q9Y3C5 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF11Q9Y3C5 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF11Q9Y3C5 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF11Q9Y3C5 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF11Q9Y3C5 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF11Q9Y3C5 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF11Q9Y3C5 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.68■□□□□ 0.42
RNF11Q9Y3C5 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.68■□□□□ 0.42
RNF11Q9Y3C5 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF11Q9Y3C5 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.68■□□□□ 0.42
RNF11Q9Y3C5 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.68■□□□□ 0.42
RNF11Q9Y3C5 AC084018.2-201ENST00000613093 2607 ntBASIC17.68■□□□□ 0.42
RNF11Q9Y3C5 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF11Q9Y3C5 AC066615.1-201ENST00000640911 628 ntBASIC17.68■□□□□ 0.42
RNF11Q9Y3C5 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF11Q9Y3C5 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF11Q9Y3C5 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF11Q9Y3C5 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF11Q9Y3C5 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF11Q9Y3C5 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF11Q9Y3C5 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 FLJ13224-201ENST00000313737 1514 ntBASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 AC010240.3-201ENST00000607688 395 ntBASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 AC024243.1-201ENST00000609234 778 ntBASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 AC090340.1-201ENST00000620778 4980 ntBASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RNF11Q9Y3C5 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF11Q9Y3C5 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF11Q9Y3C5 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RNF11Q9Y3C5 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF11Q9Y3C5 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF11Q9Y3C5 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RNF11Q9Y3C5 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF11Q9Y3C5 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF11Q9Y3C5 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF11Q9Y3C5 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
RNF11Q9Y3C5 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF11Q9Y3C5 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF11Q9Y3C5 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF11Q9Y3C5 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF11Q9Y3C5 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF11Q9Y3C5 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RNF11Q9Y3C5 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF11Q9Y3C5 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF11Q9Y3C5 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF11Q9Y3C5 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF11Q9Y3C5 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF11Q9Y3C5 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms