Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
MRPS28Q9Y2Q9 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MRPS28Q9Y2Q9 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
MRPS28Q9Y2Q9 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
MRPS28Q9Y2Q9 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MRPS28Q9Y2Q9 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
MRPS28Q9Y2Q9 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MRPS28Q9Y2Q9 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
MRPS28Q9Y2Q9 SIRPAP1-201ENST00000448467 1770 ntBASIC15.63■□□□□ 0.09
MRPS28Q9Y2Q9 CRYGFP-201ENST00000418459 633 ntBASIC15.63■□□□□ 0.09
MRPS28Q9Y2Q9 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.63■□□□□ 0.09
MRPS28Q9Y2Q9 KRT18P23-201ENST00000435622 1283 ntBASIC15.63■□□□□ 0.09
MRPS28Q9Y2Q9 FAM201B-201ENST00000458407 597 ntBASIC15.63■□□□□ 0.09
MRPS28Q9Y2Q9 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.63■□□□□ 0.09
MRPS28Q9Y2Q9 MIR4674-201ENST00000582457 87 ntBASIC15.63■□□□□ 0.09
MRPS28Q9Y2Q9 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.63■□□□□ 0.09
MRPS28Q9Y2Q9 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
MRPS28Q9Y2Q9 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
MRPS28Q9Y2Q9 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MRPS28Q9Y2Q9 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.63■□□□□ 0.09
MRPS28Q9Y2Q9 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
MRPS28Q9Y2Q9 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MRPS28Q9Y2Q9 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MRPS28Q9Y2Q9 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MRPS28Q9Y2Q9 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MRPS28Q9Y2Q9 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MRPS28Q9Y2Q9 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MRPS28Q9Y2Q9 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
MRPS28Q9Y2Q9 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MRPS28Q9Y2Q9 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
MRPS28Q9Y2Q9 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.62■□□□□ 0.09
MRPS28Q9Y2Q9 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MRPS28Q9Y2Q9 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
MRPS28Q9Y2Q9 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.62■□□□□ 0.09
MRPS28Q9Y2Q9 HOXB1-202ENST00000577092 1414 ntBASIC15.62■□□□□ 0.09
MRPS28Q9Y2Q9 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.62■□□□□ 0.09
MRPS28Q9Y2Q9 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
MRPS28Q9Y2Q9 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.62■□□□□ 0.09
MRPS28Q9Y2Q9 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
MRPS28Q9Y2Q9 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MRPS28Q9Y2Q9 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MRPS28Q9Y2Q9 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MRPS28Q9Y2Q9 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MRPS28Q9Y2Q9 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MRPS28Q9Y2Q9 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
MRPS28Q9Y2Q9 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.62■□□□□ 0.09
MRPS28Q9Y2Q9 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
MRPS28Q9Y2Q9 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
MRPS28Q9Y2Q9 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
MRPS28Q9Y2Q9 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MRPS28Q9Y2Q9 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MRPS28Q9Y2Q9 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
MRPS28Q9Y2Q9 KRT18P55-202ENST00000578578 1546 ntBASIC15.62■□□□□ 0.09
MRPS28Q9Y2Q9 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MRPS28Q9Y2Q9 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MRPS28Q9Y2Q9 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.62■□□□□ 0.09
MRPS28Q9Y2Q9 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
MRPS28Q9Y2Q9 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.62■□□□□ 0.09
MRPS28Q9Y2Q9 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
MRPS28Q9Y2Q9 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
MRPS28Q9Y2Q9 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MRPS28Q9Y2Q9 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
MRPS28Q9Y2Q9 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.61■□□□□ 0.09
MRPS28Q9Y2Q9 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MRPS28Q9Y2Q9 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MRPS28Q9Y2Q9 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MRPS28Q9Y2Q9 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MRPS28Q9Y2Q9 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
MRPS28Q9Y2Q9 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MRPS28Q9Y2Q9 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.61■□□□□ 0.09
MRPS28Q9Y2Q9 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
MRPS28Q9Y2Q9 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
MRPS28Q9Y2Q9 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.61■□□□□ 0.09
MRPS28Q9Y2Q9 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
MRPS28Q9Y2Q9 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.61■□□□□ 0.09
MRPS28Q9Y2Q9 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.61■□□□□ 0.09
MRPS28Q9Y2Q9 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.61■□□□□ 0.09
MRPS28Q9Y2Q9 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC15.61■□□□□ 0.09
MRPS28Q9Y2Q9 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.61■□□□□ 0.09
MRPS28Q9Y2Q9 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
MRPS28Q9Y2Q9 AC139713.2-201ENST00000641328 2723 ntBASIC15.61■□□□□ 0.09
MRPS28Q9Y2Q9 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
MRPS28Q9Y2Q9 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.61■□□□□ 0.09
MRPS28Q9Y2Q9 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MRPS28Q9Y2Q9 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MRPS28Q9Y2Q9 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MRPS28Q9Y2Q9 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
MRPS28Q9Y2Q9 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
MRPS28Q9Y2Q9 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MRPS28Q9Y2Q9 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MRPS28Q9Y2Q9 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.61■□□□□ 0.09
MRPS28Q9Y2Q9 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
MRPS28Q9Y2Q9 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.61■□□□□ 0.09
MRPS28Q9Y2Q9 PRORSD1P-202ENST00000563365 2154 ntBASIC15.6■□□□□ 0.09
MRPS28Q9Y2Q9 KRT8P7-201ENST00000533003 1432 ntBASIC15.6■□□□□ 0.09
MRPS28Q9Y2Q9 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.6■□□□□ 0.09
MRPS28Q9Y2Q9 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MRPS28Q9Y2Q9 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
MRPS28Q9Y2Q9 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MRPS28Q9Y2Q9 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms