Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LHX6Q9UPM6 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.12■□□□□ 0.33
LHX6Q9UPM6 UNC93B6-202ENST00000528242 690 ntBASIC17.12■□□□□ 0.33
LHX6Q9UPM6 RN7SL440P-201ENST00000577855 343 ntBASIC17.12■□□□□ 0.33
LHX6Q9UPM6 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.12■□□□□ 0.33
LHX6Q9UPM6 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.12■□□□□ 0.33
LHX6Q9UPM6 AF228730.6-201ENST00000641497 218 ntBASIC17.12■□□□□ 0.33
LHX6Q9UPM6 AC084121.3-201ENST00000641716 218 ntBASIC17.12■□□□□ 0.33
LHX6Q9UPM6 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
LHX6Q9UPM6 AC105233.6-201ENST00000642093 218 ntBASIC17.12■□□□□ 0.33
LHX6Q9UPM6 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LHX6Q9UPM6 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LHX6Q9UPM6 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.12■□□□□ 0.33
LHX6Q9UPM6 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.12■□□□□ 0.33
LHX6Q9UPM6 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LHX6Q9UPM6 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
LHX6Q9UPM6 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LHX6Q9UPM6 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.12■□□□□ 0.33
LHX6Q9UPM6 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LHX6Q9UPM6 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LHX6Q9UPM6 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.12■□□□□ 0.33
LHX6Q9UPM6 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LHX6Q9UPM6 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
LHX6Q9UPM6 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
LHX6Q9UPM6 TCF3P1-201ENST00000423021 1937 ntBASIC17.11■□□□□ 0.33
LHX6Q9UPM6 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LHX6Q9UPM6 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LHX6Q9UPM6 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LHX6Q9UPM6 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LHX6Q9UPM6 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LHX6Q9UPM6 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LHX6Q9UPM6 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LHX6Q9UPM6 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.11■□□□□ 0.33
LHX6Q9UPM6 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.11■□□□□ 0.33
LHX6Q9UPM6 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LHX6Q9UPM6 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.11■□□□□ 0.33
LHX6Q9UPM6 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LHX6Q9UPM6 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LHX6Q9UPM6 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
LHX6Q9UPM6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LHX6Q9UPM6 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LHX6Q9UPM6 TREX1-205ENST00000625293 1783 ntBASIC17.11■□□□□ 0.33
LHX6Q9UPM6 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LHX6Q9UPM6 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LHX6Q9UPM6 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.11■□□□□ 0.33
LHX6Q9UPM6 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.11■□□□□ 0.33
LHX6Q9UPM6 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC17.11■□□□□ 0.33
LHX6Q9UPM6 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC17.11■□□□□ 0.33
LHX6Q9UPM6 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
LHX6Q9UPM6 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.11■□□□□ 0.33
LHX6Q9UPM6 YBX1P5-201ENST00000509441 847 ntBASIC17.11■□□□□ 0.33
LHX6Q9UPM6 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.11■□□□□ 0.33
LHX6Q9UPM6 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.11■□□□□ 0.33
LHX6Q9UPM6 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.11■□□□□ 0.33
LHX6Q9UPM6 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LHX6Q9UPM6 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.11■□□□□ 0.33
LHX6Q9UPM6 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LHX6Q9UPM6 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.11■□□□□ 0.33
LHX6Q9UPM6 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LHX6Q9UPM6 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.11■□□□□ 0.33
LHX6Q9UPM6 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LHX6Q9UPM6 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LHX6Q9UPM6 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
LHX6Q9UPM6 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LHX6Q9UPM6 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LHX6Q9UPM6 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LHX6Q9UPM6 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LHX6Q9UPM6 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.1■□□□□ 0.33
LHX6Q9UPM6 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LHX6Q9UPM6 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LHX6Q9UPM6 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LHX6Q9UPM6 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LHX6Q9UPM6 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LHX6Q9UPM6 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
LHX6Q9UPM6 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.1■□□□□ 0.33
LHX6Q9UPM6 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LHX6Q9UPM6 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.1■□□□□ 0.33
LHX6Q9UPM6 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
LHX6Q9UPM6 AC010740.1-201ENST00000417035 684 ntBASIC17.1■□□□□ 0.33
LHX6Q9UPM6 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.1■□□□□ 0.33
LHX6Q9UPM6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.1■□□□□ 0.33
LHX6Q9UPM6 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.1■□□□□ 0.33
LHX6Q9UPM6 AC005336.2-201ENST00000593183 939 ntBASIC17.1■□□□□ 0.33
LHX6Q9UPM6 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.1■□□□□ 0.33
LHX6Q9UPM6 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.1■□□□□ 0.33
LHX6Q9UPM6 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.1■□□□□ 0.33
LHX6Q9UPM6 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LHX6Q9UPM6 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LHX6Q9UPM6 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
LHX6Q9UPM6 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LHX6Q9UPM6 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LHX6Q9UPM6 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LHX6Q9UPM6 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LHX6Q9UPM6 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
LHX6Q9UPM6 AL353692.3-201ENST00000407031 1396 ntBASIC17.1■□□□□ 0.33
LHX6Q9UPM6 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LHX6Q9UPM6 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LHX6Q9UPM6 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LHX6Q9UPM6 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.1■□□□□ 0.33
LHX6Q9UPM6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms