Protein–RNA interactions for Protein: Q9ULS5

TMCC3, Transmembrane and coiled-coil domain protein 3, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3Q9ULS5 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMCC3Q9ULS5 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMCC3Q9ULS5 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TMCC3Q9ULS5 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMCC3Q9ULS5 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TMCC3Q9ULS5 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMCC3Q9ULS5 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TMCC3Q9ULS5 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TMCC3Q9ULS5 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMCC3Q9ULS5 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.83■□□□□ 0.29
TMCC3Q9ULS5 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
TMCC3Q9ULS5 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TMCC3Q9ULS5 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMCC3Q9ULS5 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.83■□□□□ 0.28
TMCC3Q9ULS5 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMCC3Q9ULS5 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TMCC3Q9ULS5 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TMCC3Q9ULS5 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TMCC3Q9ULS5 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMCC3Q9ULS5 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.83■□□□□ 0.28
TMCC3Q9ULS5 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
TMCC3Q9ULS5 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TMCC3Q9ULS5 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TMCC3Q9ULS5 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.83■□□□□ 0.28
TMCC3Q9ULS5 MIR4651-201ENST00000582622 73 ntBASIC16.83■□□□□ 0.28
TMCC3Q9ULS5 AF186192.3-201ENST00000583427 947 ntBASIC16.83■□□□□ 0.28
TMCC3Q9ULS5 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
TMCC3Q9ULS5 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMCC3Q9ULS5 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.83■□□□□ 0.28
TMCC3Q9ULS5 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMCC3Q9ULS5 AC012317.2-201ENST00000623305 2251 ntBASIC16.83■□□□□ 0.28
TMCC3Q9ULS5 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
TMCC3Q9ULS5 AC073648.6-201ENST00000641589 218 ntBASIC16.83■□□□□ 0.28
TMCC3Q9ULS5 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMCC3Q9ULS5 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMCC3Q9ULS5 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TMCC3Q9ULS5 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMCC3Q9ULS5 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TMCC3Q9ULS5 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.83■□□□□ 0.28
TMCC3Q9ULS5 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMCC3Q9ULS5 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMCC3Q9ULS5 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TMCC3Q9ULS5 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.82■□□□□ 0.28
TMCC3Q9ULS5 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TMCC3Q9ULS5 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMCC3Q9ULS5 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMCC3Q9ULS5 GPAT2P1-201ENST00000444924 1672 ntBASIC16.82■□□□□ 0.28
TMCC3Q9ULS5 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.82■□□□□ 0.28
TMCC3Q9ULS5 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.82■□□□□ 0.28
TMCC3Q9ULS5 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.82■□□□□ 0.28
TMCC3Q9ULS5 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.82■□□□□ 0.28
TMCC3Q9ULS5 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.82■□□□□ 0.28
TMCC3Q9ULS5 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMCC3Q9ULS5 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMCC3Q9ULS5 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMCC3Q9ULS5 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMCC3Q9ULS5 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.82■□□□□ 0.28
TMCC3Q9ULS5 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMCC3Q9ULS5 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
TMCC3Q9ULS5 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TMCC3Q9ULS5 AC006058.3-201ENST00000606217 1069 ntBASIC16.82■□□□□ 0.28
TMCC3Q9ULS5 AP000692.2-201ENST00000608391 879 ntBASIC16.82■□□□□ 0.28
TMCC3Q9ULS5 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TMCC3Q9ULS5 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMCC3Q9ULS5 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMCC3Q9ULS5 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMCC3Q9ULS5 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TMCC3Q9ULS5 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMCC3Q9ULS5 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMCC3Q9ULS5 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMCC3Q9ULS5 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMCC3Q9ULS5 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMCC3Q9ULS5 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMCC3Q9ULS5 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
TMCC3Q9ULS5 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
TMCC3Q9ULS5 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.82■□□□□ 0.28
TMCC3Q9ULS5 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TMCC3Q9ULS5 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TMCC3Q9ULS5 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMCC3Q9ULS5 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TMCC3Q9ULS5 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMCC3Q9ULS5 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TMCC3Q9ULS5 AC009102.3-201ENST00000623118 1491 ntBASIC16.81■□□□□ 0.28
TMCC3Q9ULS5 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TMCC3Q9ULS5 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TMCC3Q9ULS5 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
TMCC3Q9ULS5 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMCC3Q9ULS5 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TMCC3Q9ULS5 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMCC3Q9ULS5 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMCC3Q9ULS5 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.81■□□□□ 0.28
TMCC3Q9ULS5 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.81■□□□□ 0.28
TMCC3Q9ULS5 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.81■□□□□ 0.28
TMCC3Q9ULS5 C1QBPP2-201ENST00000528754 825 ntBASIC16.81■□□□□ 0.28
TMCC3Q9ULS5 RARRES2P10-201ENST00000564312 460 ntBASIC16.81■□□□□ 0.28
TMCC3Q9ULS5 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.81■□□□□ 0.28
TMCC3Q9ULS5 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TMCC3Q9ULS5 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TMCC3Q9ULS5 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TMCC3Q9ULS5 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms