Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC10Q9NYD6 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC10Q9NYD6 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC10Q9NYD6 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC10Q9NYD6 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC10Q9NYD6 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC10Q9NYD6 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC10Q9NYD6 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
HOXC10Q9NYD6 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.68■□□□□ 0.9
HOXC10Q9NYD6 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
HOXC10Q9NYD6 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.68■□□□□ 0.9
HOXC10Q9NYD6 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.68■□□□□ 0.9
HOXC10Q9NYD6 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.68■□□□□ 0.9
HOXC10Q9NYD6 IGHV3-22-201ENST00000520721 359 ntBASIC20.68■□□□□ 0.9
HOXC10Q9NYD6 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.68■□□□□ 0.9
HOXC10Q9NYD6 AC145285.3-201ENST00000564603 959 ntBASIC20.68■□□□□ 0.9
HOXC10Q9NYD6 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.68■□□□□ 0.9
HOXC10Q9NYD6 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.68■□□□□ 0.9
HOXC10Q9NYD6 NKAPP1-205ENST00000585790 367 ntBASIC20.68■□□□□ 0.9
HOXC10Q9NYD6 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.68■□□□□ 0.9
HOXC10Q9NYD6 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
HOXC10Q9NYD6 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
HOXC10Q9NYD6 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC10Q9NYD6 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC10Q9NYD6 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC10Q9NYD6 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
HOXC10Q9NYD6 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC10Q9NYD6 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXC10Q9NYD6 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXC10Q9NYD6 AC132938.6-201ENST00000623828 1655 ntBASIC20.67■□□□□ 0.9
HOXC10Q9NYD6 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.67■□□□□ 0.9
HOXC10Q9NYD6 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXC10Q9NYD6 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXC10Q9NYD6 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXC10Q9NYD6 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXC10Q9NYD6 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
HOXC10Q9NYD6 ESPNP-201ENST00000270691 2015 ntBASIC20.67■□□□□ 0.9
HOXC10Q9NYD6 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXC10Q9NYD6 AC007967.3-201ENST00000434308 558 ntBASIC20.67■□□□□ 0.9
HOXC10Q9NYD6 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.67■□□□□ 0.9
HOXC10Q9NYD6 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
HOXC10Q9NYD6 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
HOXC10Q9NYD6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.67■□□□□ 0.9
HOXC10Q9NYD6 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXC10Q9NYD6 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXC10Q9NYD6 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.67■□□□□ 0.9
HOXC10Q9NYD6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
HOXC10Q9NYD6 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC10Q9NYD6 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.66■□□□□ 0.9
HOXC10Q9NYD6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC10Q9NYD6 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC10Q9NYD6 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC10Q9NYD6 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC10Q9NYD6 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC10Q9NYD6 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.66■□□□□ 0.9
HOXC10Q9NYD6 MIR940-201ENST00000401276 94 ntBASIC20.66■□□□□ 0.9
HOXC10Q9NYD6 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.66■□□□□ 0.9
HOXC10Q9NYD6 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.66■□□□□ 0.9
HOXC10Q9NYD6 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC10Q9NYD6 AC025062.2-201ENST00000605477 670 ntBASIC20.66■□□□□ 0.9
HOXC10Q9NYD6 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.66■□□□□ 0.9
HOXC10Q9NYD6 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
HOXC10Q9NYD6 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.66■□□□□ 0.9
HOXC10Q9NYD6 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.66■□□□□ 0.9
HOXC10Q9NYD6 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
HOXC10Q9NYD6 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC10Q9NYD6 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC10Q9NYD6 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.66■□□□□ 0.9
HOXC10Q9NYD6 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC10Q9NYD6 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXC10Q9NYD6 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXC10Q9NYD6 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXC10Q9NYD6 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXC10Q9NYD6 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXC10Q9NYD6 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXC10Q9NYD6 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.65■□□□□ 0.9
HOXC10Q9NYD6 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXC10Q9NYD6 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXC10Q9NYD6 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXC10Q9NYD6 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
HOXC10Q9NYD6 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXC10Q9NYD6 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXC10Q9NYD6 AC096633.1-201ENST00000422446 749 ntBASIC20.65■□□□□ 0.9
HOXC10Q9NYD6 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.65■□□□□ 0.9
HOXC10Q9NYD6 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.65■□□□□ 0.9
HOXC10Q9NYD6 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXC10Q9NYD6 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.65■□□□□ 0.9
HOXC10Q9NYD6 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
HOXC10Q9NYD6 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXC10Q9NYD6 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXC10Q9NYD6 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXC10Q9NYD6 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXC10Q9NYD6 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HOXC10Q9NYD6 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.9
HOXC10Q9NYD6 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXC10Q9NYD6 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HOXC10Q9NYD6 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXC10Q9NYD6 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HOXC10Q9NYD6 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.64■□□□□ 0.89
HOXC10Q9NYD6 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms