Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MKS1Q9NXB0 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.89■□□□□ 0.46
MKS1Q9NXB0 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
MKS1Q9NXB0 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
MKS1Q9NXB0 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.89■□□□□ 0.45
MKS1Q9NXB0 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MKS1Q9NXB0 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MKS1Q9NXB0 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
MKS1Q9NXB0 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.89■□□□□ 0.45
MKS1Q9NXB0 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
MKS1Q9NXB0 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.89■□□□□ 0.45
MKS1Q9NXB0 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MKS1Q9NXB0 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MKS1Q9NXB0 ID1-201ENST00000376105 1233 ntBASIC17.89■□□□□ 0.45
MKS1Q9NXB0 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.89■□□□□ 0.45
MKS1Q9NXB0 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.89■□□□□ 0.45
MKS1Q9NXB0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.89■□□□□ 0.45
MKS1Q9NXB0 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MKS1Q9NXB0 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MKS1Q9NXB0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MKS1Q9NXB0 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
MKS1Q9NXB0 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
MKS1Q9NXB0 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
MKS1Q9NXB0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MKS1Q9NXB0 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.89■□□□□ 0.45
MKS1Q9NXB0 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
MKS1Q9NXB0 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MKS1Q9NXB0 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MKS1Q9NXB0 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.88■□□□□ 0.45
MKS1Q9NXB0 AC084018.2-201ENST00000613093 2607 ntBASIC17.88■□□□□ 0.45
MKS1Q9NXB0 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.88■□□□□ 0.45
MKS1Q9NXB0 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
MKS1Q9NXB0 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MKS1Q9NXB0 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MKS1Q9NXB0 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MKS1Q9NXB0 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
MKS1Q9NXB0 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MKS1Q9NXB0 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
MKS1Q9NXB0 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.88■□□□□ 0.45
MKS1Q9NXB0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.88■□□□□ 0.45
MKS1Q9NXB0 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.88■□□□□ 0.45
MKS1Q9NXB0 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.88■□□□□ 0.45
MKS1Q9NXB0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.88■□□□□ 0.45
MKS1Q9NXB0 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.88■□□□□ 0.45
MKS1Q9NXB0 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.88■□□□□ 0.45
MKS1Q9NXB0 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
MKS1Q9NXB0 AC112497.1-201ENST00000624824 639 ntBASIC17.88■□□□□ 0.45
MKS1Q9NXB0 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.88■□□□□ 0.45
MKS1Q9NXB0 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MKS1Q9NXB0 AC022898.2-201ENST00000616822 1312 ntBASIC17.88■□□□□ 0.45
MKS1Q9NXB0 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MKS1Q9NXB0 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.88■□□□□ 0.45
MKS1Q9NXB0 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.88■□□□□ 0.45
MKS1Q9NXB0 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MKS1Q9NXB0 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
MKS1Q9NXB0 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.88■□□□□ 0.45
MKS1Q9NXB0 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.88■□□□□ 0.45
MKS1Q9NXB0 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MKS1Q9NXB0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MKS1Q9NXB0 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MKS1Q9NXB0 NKILA-202ENST00000614771 2598 ntBASIC17.87■□□□□ 0.45
MKS1Q9NXB0 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MKS1Q9NXB0 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MKS1Q9NXB0 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
MKS1Q9NXB0 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MKS1Q9NXB0 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MKS1Q9NXB0 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MKS1Q9NXB0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MKS1Q9NXB0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
MKS1Q9NXB0 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MKS1Q9NXB0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.87■□□□□ 0.45
MKS1Q9NXB0 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MKS1Q9NXB0 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MKS1Q9NXB0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
MKS1Q9NXB0 SLC25A1P2-201ENST00000430693 912 ntBASIC17.87■□□□□ 0.45
MKS1Q9NXB0 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.87■□□□□ 0.45
MKS1Q9NXB0 AP003041.3-201ENST00000527151 707 ntBASIC17.87■□□□□ 0.45
MKS1Q9NXB0 AL359736.2-201ENST00000621992 437 ntBASIC17.87■□□□□ 0.45
MKS1Q9NXB0 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MKS1Q9NXB0 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.87■□□□□ 0.45
MKS1Q9NXB0 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.87■□□□□ 0.45
MKS1Q9NXB0 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MKS1Q9NXB0 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MKS1Q9NXB0 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
MKS1Q9NXB0 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.87■□□□□ 0.45
MKS1Q9NXB0 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MKS1Q9NXB0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
MKS1Q9NXB0 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
MKS1Q9NXB0 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MKS1Q9NXB0 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MKS1Q9NXB0 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MKS1Q9NXB0 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
MKS1Q9NXB0 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MKS1Q9NXB0 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MKS1Q9NXB0 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
MKS1Q9NXB0 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MKS1Q9NXB0 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MKS1Q9NXB0 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.86■□□□□ 0.45
MKS1Q9NXB0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
MKS1Q9NXB0 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms