Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 MMP23A-201ENST00000234610 1017 ntBASIC16.9■□□□□ 0.3
RLIMQ9NVW2 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RLIMQ9NVW2 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RLIMQ9NVW2 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RLIMQ9NVW2 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RLIMQ9NVW2 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.9■□□□□ 0.3
RLIMQ9NVW2 AL596275.1-201ENST00000423464 877 ntBASIC16.9■□□□□ 0.3
RLIMQ9NVW2 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.9■□□□□ 0.3
RLIMQ9NVW2 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.9■□□□□ 0.3
RLIMQ9NVW2 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RLIMQ9NVW2 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RLIMQ9NVW2 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.9■□□□□ 0.3
RLIMQ9NVW2 NAPSB-206ENST00000562112 1266 ntBASIC16.9■□□□□ 0.3
RLIMQ9NVW2 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.9■□□□□ 0.3
RLIMQ9NVW2 AC010653.2-201ENST00000623505 997 ntBASIC16.9■□□□□ 0.3
RLIMQ9NVW2 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RLIMQ9NVW2 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RLIMQ9NVW2 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.9■□□□□ 0.3
RLIMQ9NVW2 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RLIMQ9NVW2 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RLIMQ9NVW2 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RLIMQ9NVW2 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.9■□□□□ 0.3
RLIMQ9NVW2 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.9■□□□□ 0.3
RLIMQ9NVW2 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RLIMQ9NVW2 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RLIMQ9NVW2 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.89■□□□□ 0.3
RLIMQ9NVW2 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RLIMQ9NVW2 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RLIMQ9NVW2 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RLIMQ9NVW2 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RLIMQ9NVW2 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.89■□□□□ 0.29
RLIMQ9NVW2 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.89■□□□□ 0.29
RLIMQ9NVW2 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RLIMQ9NVW2 KRT8P7-201ENST00000533003 1432 ntBASIC16.89■□□□□ 0.29
RLIMQ9NVW2 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RLIMQ9NVW2 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RLIMQ9NVW2 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RLIMQ9NVW2 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RLIMQ9NVW2 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.89■□□□□ 0.29
RLIMQ9NVW2 AC093827.2-201ENST00000512654 315 ntBASIC16.89■□□□□ 0.29
RLIMQ9NVW2 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RLIMQ9NVW2 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.89■□□□□ 0.29
RLIMQ9NVW2 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
RLIMQ9NVW2 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RLIMQ9NVW2 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.89■□□□□ 0.29
RLIMQ9NVW2 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RLIMQ9NVW2 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.89■□□□□ 0.29
RLIMQ9NVW2 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
RLIMQ9NVW2 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RLIMQ9NVW2 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.89■□□□□ 0.29
RLIMQ9NVW2 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RLIMQ9NVW2 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RLIMQ9NVW2 PRORSD1P-202ENST00000563365 2154 ntBASIC16.89■□□□□ 0.29
RLIMQ9NVW2 AC106820.2-201ENST00000563775 3264 ntBASIC16.89■□□□□ 0.29
RLIMQ9NVW2 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.89■□□□□ 0.29
RLIMQ9NVW2 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RLIMQ9NVW2 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RLIMQ9NVW2 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.89■□□□□ 0.29
RLIMQ9NVW2 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RLIMQ9NVW2 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RLIMQ9NVW2 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RLIMQ9NVW2 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RLIMQ9NVW2 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RLIMQ9NVW2 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RLIMQ9NVW2 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.88■□□□□ 0.29
RLIMQ9NVW2 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RLIMQ9NVW2 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.88■□□□□ 0.29
RLIMQ9NVW2 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RLIMQ9NVW2 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RLIMQ9NVW2 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RLIMQ9NVW2 AC108860.2-201ENST00000562760 2183 ntBASIC16.88■□□□□ 0.29
RLIMQ9NVW2 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
RLIMQ9NVW2 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RLIMQ9NVW2 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.88■□□□□ 0.29
RLIMQ9NVW2 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.88■□□□□ 0.29
RLIMQ9NVW2 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RLIMQ9NVW2 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RLIMQ9NVW2 MIR149-201ENST00000384879 89 ntBASIC16.88■□□□□ 0.29
RLIMQ9NVW2 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RLIMQ9NVW2 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RLIMQ9NVW2 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.88■□□□□ 0.29
RLIMQ9NVW2 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RLIMQ9NVW2 ECEL1P2-202ENST00000465689 757 ntBASIC16.88■□□□□ 0.29
RLIMQ9NVW2 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
RLIMQ9NVW2 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RLIMQ9NVW2 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.88■□□□□ 0.29
RLIMQ9NVW2 AC112497.1-201ENST00000624824 639 ntBASIC16.88■□□□□ 0.29
RLIMQ9NVW2 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
RLIMQ9NVW2 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RLIMQ9NVW2 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RLIMQ9NVW2 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RLIMQ9NVW2 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RLIMQ9NVW2 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RLIMQ9NVW2 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
RLIMQ9NVW2 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.88■□□□□ 0.29
RLIMQ9NVW2 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RLIMQ9NVW2 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.87■□□□□ 0.29
RLIMQ9NVW2 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RLIMQ9NVW2 AC090340.1-201ENST00000620778 4980 ntBASIC16.87■□□□□ 0.29
RLIMQ9NVW2 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms