Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 AC004264.1-201ENST00000608354 794 ntBASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 KRT8P45-201ENST00000414328 1447 ntBASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 AL023806.1-201ENST00000603994 1649 ntBASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 AL137784.2-201ENST00000607332 1000 ntBASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 AC008556.1-201ENST00000610908 2040 ntBASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 AL357033.4-201ENST00000617703 1807 ntBASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 NF2-208ENST00000403435 2568 ntTSL 5 BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
SND1-IT1Q9HBX3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC12.15□□□□□ -0.46
SND1-IT1Q9HBX3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SND1-IT1Q9HBX3 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC12.15□□□□□ -0.46
SND1-IT1Q9HBX3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SND1-IT1Q9HBX3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC12.15□□□□□ -0.46
SND1-IT1Q9HBX3 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SND1-IT1Q9HBX3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SND1-IT1Q9HBX3 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC12.15□□□□□ -0.46
SND1-IT1Q9HBX3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC12.15□□□□□ -0.46
SND1-IT1Q9HBX3 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
SND1-IT1Q9HBX3 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC12.15□□□□□ -0.46
SND1-IT1Q9HBX3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SND1-IT1Q9HBX3 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
SND1-IT1Q9HBX3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SND1-IT1Q9HBX3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SND1-IT1Q9HBX3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SND1-IT1Q9HBX3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SND1-IT1Q9HBX3 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SND1-IT1Q9HBX3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
SND1-IT1Q9HBX3 TSPY6P-201ENST00000448518 926 ntBASIC12.15□□□□□ -0.46
SND1-IT1Q9HBX3 F2R-202ENST00000505600 442 ntTSL 2 BASIC12.15□□□□□ -0.46
SND1-IT1Q9HBX3 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
SND1-IT1Q9HBX3 IKBKGP1-201ENST00000612193 1073 ntBASIC12.15□□□□□ -0.46
SND1-IT1Q9HBX3 Six3os1_6.1-201ENST00000620790 196 ntBASIC12.15□□□□□ -0.46
SND1-IT1Q9HBX3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms