Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC20.19■□□□□ 0.82
RNF39Q9H2S5 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.19■□□□□ 0.82
RNF39Q9H2S5 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.19■□□□□ 0.82
RNF39Q9H2S5 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC20.19■□□□□ 0.82
RNF39Q9H2S5 AC009093.7-201ENST00000623853 1223 ntBASIC20.19■□□□□ 0.82
RNF39Q9H2S5 AC026422.1-201ENST00000623961 452 ntBASIC20.19■□□□□ 0.82
RNF39Q9H2S5 LINC02246-207ENST00000630354 524 ntTSL 5 BASIC20.19■□□□□ 0.82
RNF39Q9H2S5 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF39Q9H2S5 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RNF39Q9H2S5 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RNF39Q9H2S5 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RNF39Q9H2S5 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF39Q9H2S5 AL358781.1-202ENST00000321081 1360 ntBASIC20.19■□□□□ 0.82
RNF39Q9H2S5 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.19■□□□□ 0.82
RNF39Q9H2S5 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF39Q9H2S5 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF39Q9H2S5 KRT8P7-201ENST00000533003 1432 ntBASIC20.19■□□□□ 0.82
RNF39Q9H2S5 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.18■□□□□ 0.82
RNF39Q9H2S5 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RNF39Q9H2S5 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.18■□□□□ 0.82
RNF39Q9H2S5 AL357033.4-201ENST00000617703 1807 ntBASIC20.18■□□□□ 0.82
RNF39Q9H2S5 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.18■□□□□ 0.82
RNF39Q9H2S5 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF39Q9H2S5 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.18■□□□□ 0.82
RNF39Q9H2S5 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF39Q9H2S5 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.18■□□□□ 0.82
RNF39Q9H2S5 AC034236.2-201ENST00000606662 1610 ntBASIC20.18■□□□□ 0.82
RNF39Q9H2S5 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.18■□□□□ 0.82
RNF39Q9H2S5 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF39Q9H2S5 VN1R21P-201ENST00000426703 765 ntBASIC20.18■□□□□ 0.82
RNF39Q9H2S5 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC20.18■□□□□ 0.82
RNF39Q9H2S5 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC20.18■□□□□ 0.82
RNF39Q9H2S5 AL136038.4-201ENST00000603606 1261 ntBASIC20.18■□□□□ 0.82
RNF39Q9H2S5 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.18■□□□□ 0.82
RNF39Q9H2S5 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
RNF39Q9H2S5 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.18■□□□□ 0.82
RNF39Q9H2S5 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF39Q9H2S5 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF39Q9H2S5 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF39Q9H2S5 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.18■□□□□ 0.82
RNF39Q9H2S5 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RNF39Q9H2S5 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.18■□□□□ 0.82
RNF39Q9H2S5 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF39Q9H2S5 RPL35A-206ENST00000464167 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF39Q9H2S5 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RNF39Q9H2S5 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF39Q9H2S5 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
RNF39Q9H2S5 HEIH-201ENST00000623091 1652 ntBASIC20.17■□□□□ 0.82
RNF39Q9H2S5 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RNF39Q9H2S5 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.17■□□□□ 0.82
RNF39Q9H2S5 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.17■□□□□ 0.82
RNF39Q9H2S5 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF39Q9H2S5 TRAF3IP3-201ENST00000367023 1065 ntTSL 3 BASIC20.17■□□□□ 0.82
RNF39Q9H2S5 MTCO3P30-201ENST00000426425 670 ntBASIC20.17■□□□□ 0.82
RNF39Q9H2S5 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.17■□□□□ 0.82
RNF39Q9H2S5 AC112206.4-201ENST00000515142 405 ntBASIC20.17■□□□□ 0.82
RNF39Q9H2S5 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC20.17■□□□□ 0.82
RNF39Q9H2S5 ELOC-208ENST00000523815 719 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
RNF39Q9H2S5 OR4A46P-201ENST00000527255 933 ntBASIC20.17■□□□□ 0.82
RNF39Q9H2S5 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.17■□□□□ 0.82
RNF39Q9H2S5 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC20.17■□□□□ 0.82
RNF39Q9H2S5 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RNF39Q9H2S5 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.17■□□□□ 0.82
RNF39Q9H2S5 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF39Q9H2S5 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC20.17■□□□□ 0.82
RNF39Q9H2S5 LINC01892-202ENST00000583985 540 ntTSL 4 BASIC20.17■□□□□ 0.82
RNF39Q9H2S5 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.17■□□□□ 0.82
RNF39Q9H2S5 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC20.17■□□□□ 0.82
RNF39Q9H2S5 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.17■□□□□ 0.82
RNF39Q9H2S5 AP003497.2-201ENST00000624220 967 ntBASIC20.17■□□□□ 0.82
RNF39Q9H2S5 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC20.17■□□□□ 0.82
RNF39Q9H2S5 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RNF39Q9H2S5 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RNF39Q9H2S5 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF39Q9H2S5 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.17■□□□□ 0.82
RNF39Q9H2S5 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RNF39Q9H2S5 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RNF39Q9H2S5 AL162741.1-201ENST00000565563 1558 ntBASIC20.17■□□□□ 0.82
RNF39Q9H2S5 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
RNF39Q9H2S5 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RNF39Q9H2S5 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.16■□□□□ 0.82
RNF39Q9H2S5 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF39Q9H2S5 TCEAL1-201ENST00000372624 1164 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF39Q9H2S5 TCEAL1-202ENST00000372625 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF39Q9H2S5 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF39Q9H2S5 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC20.16■□□□□ 0.82
RNF39Q9H2S5 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC20.16■□□□□ 0.82
RNF39Q9H2S5 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC20.16■□□□□ 0.82
RNF39Q9H2S5 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC20.16■□□□□ 0.82
RNF39Q9H2S5 HCG4P8-203ENST00000443049 980 ntBASIC20.16■□□□□ 0.82
RNF39Q9H2S5 HULC-201ENST00000503668 556 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RNF39Q9H2S5 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.16■□□□□ 0.82
RNF39Q9H2S5 AC011498.5-201ENST00000592027 486 ntBASIC20.16■□□□□ 0.82
RNF39Q9H2S5 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.16■□□□□ 0.82
RNF39Q9H2S5 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
RNF39Q9H2S5 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.16■□□□□ 0.82
RNF39Q9H2S5 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF39Q9H2S5 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF39Q9H2S5 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF39Q9H2S5 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms