Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.25■□□□□ 0.51
VPS11Q9H270 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VPS11Q9H270 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VPS11Q9H270 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
VPS11Q9H270 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
VPS11Q9H270 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.25■□□□□ 0.51
VPS11Q9H270 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VPS11Q9H270 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.25■□□□□ 0.51
VPS11Q9H270 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VPS11Q9H270 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.25■□□□□ 0.51
VPS11Q9H270 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.25■□□□□ 0.51
VPS11Q9H270 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
VPS11Q9H270 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VPS11Q9H270 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VPS11Q9H270 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VPS11Q9H270 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
VPS11Q9H270 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VPS11Q9H270 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.25■□□□□ 0.51
VPS11Q9H270 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VPS11Q9H270 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.25■□□□□ 0.51
VPS11Q9H270 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.25■□□□□ 0.51
VPS11Q9H270 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.25■□□□□ 0.51
VPS11Q9H270 DGCR10-201ENST00000609839 495 ntBASIC18.25■□□□□ 0.51
VPS11Q9H270 AC141586.5-201ENST00000624546 2050 ntBASIC18.25■□□□□ 0.51
VPS11Q9H270 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
VPS11Q9H270 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
VPS11Q9H270 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.25■□□□□ 0.51
VPS11Q9H270 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
VPS11Q9H270 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.25■□□□□ 0.51
VPS11Q9H270 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.25■□□□□ 0.51
VPS11Q9H270 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VPS11Q9H270 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VPS11Q9H270 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
VPS11Q9H270 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VPS11Q9H270 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VPS11Q9H270 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.24■□□□□ 0.51
VPS11Q9H270 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VPS11Q9H270 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
VPS11Q9H270 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
VPS11Q9H270 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
VPS11Q9H270 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
VPS11Q9H270 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
VPS11Q9H270 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
VPS11Q9H270 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.24■□□□□ 0.51
VPS11Q9H270 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
VPS11Q9H270 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VPS11Q9H270 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VPS11Q9H270 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VPS11Q9H270 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
VPS11Q9H270 KRT18P29-201ENST00000397031 1267 ntBASIC18.24■□□□□ 0.51
VPS11Q9H270 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
VPS11Q9H270 NUDT16P1-203ENST00000513809 620 ntBASIC18.24■□□□□ 0.51
VPS11Q9H270 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.24■□□□□ 0.51
VPS11Q9H270 MIR3180-5-201ENST00000583743 153 ntBASIC18.24■□□□□ 0.51
VPS11Q9H270 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.24■□□□□ 0.51
VPS11Q9H270 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.24■□□□□ 0.51
VPS11Q9H270 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.24■□□□□ 0.51
VPS11Q9H270 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.24■□□□□ 0.51
VPS11Q9H270 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
VPS11Q9H270 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.24■□□□□ 0.51
VPS11Q9H270 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VPS11Q9H270 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.24■□□□□ 0.51
VPS11Q9H270 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.24■□□□□ 0.51
VPS11Q9H270 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VPS11Q9H270 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VPS11Q9H270 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VPS11Q9H270 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.24■□□□□ 0.51
VPS11Q9H270 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
VPS11Q9H270 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
VPS11Q9H270 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
VPS11Q9H270 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.23■□□□□ 0.51
VPS11Q9H270 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
VPS11Q9H270 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
VPS11Q9H270 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
VPS11Q9H270 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
VPS11Q9H270 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VPS11Q9H270 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
VPS11Q9H270 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.23■□□□□ 0.51
VPS11Q9H270 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
VPS11Q9H270 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
VPS11Q9H270 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VPS11Q9H270 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.23■□□□□ 0.51
VPS11Q9H270 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
VPS11Q9H270 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
VPS11Q9H270 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.23■□□□□ 0.51
VPS11Q9H270 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
VPS11Q9H270 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
VPS11Q9H270 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.23■□□□□ 0.51
VPS11Q9H270 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.23■□□□□ 0.51
VPS11Q9H270 AC116562.2-201ENST00000507042 360 ntBASIC18.23■□□□□ 0.51
VPS11Q9H270 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.23■□□□□ 0.51
VPS11Q9H270 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.23■□□□□ 0.51
VPS11Q9H270 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.23■□□□□ 0.51
VPS11Q9H270 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.23■□□□□ 0.51
VPS11Q9H270 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VPS11Q9H270 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VPS11Q9H270 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VPS11Q9H270 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
VPS11Q9H270 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VPS11Q9H270 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms