Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNTNAP3Q9BZ76 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CNTNAP3Q9BZ76 AC112777.1-201ENST00000540175 1423 ntBASIC17.21■□□□□ 0.35
CNTNAP3Q9BZ76 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CNTNAP3Q9BZ76 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNTNAP3Q9BZ76 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CNTNAP3Q9BZ76 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNTNAP3Q9BZ76 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CNTNAP3Q9BZ76 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNTNAP3Q9BZ76 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNTNAP3Q9BZ76 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CNTNAP3Q9BZ76 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CNTNAP3Q9BZ76 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNTNAP3Q9BZ76 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNTNAP3Q9BZ76 MIR661-201ENST00000384842 89 ntBASIC17.21■□□□□ 0.35
CNTNAP3Q9BZ76 LAGE3P1-201ENST00000425356 484 ntBASIC17.21■□□□□ 0.35
CNTNAP3Q9BZ76 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.21■□□□□ 0.35
CNTNAP3Q9BZ76 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CNTNAP3Q9BZ76 AC109322.1-201ENST00000524499 1264 ntBASIC17.21■□□□□ 0.35
CNTNAP3Q9BZ76 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CNTNAP3Q9BZ76 CR383656.12-201ENST00000549567 513 ntBASIC17.21■□□□□ 0.35
CNTNAP3Q9BZ76 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CNTNAP3Q9BZ76 AC018845.2-201ENST00000568326 409 ntBASIC17.21■□□□□ 0.35
CNTNAP3Q9BZ76 NKAPP1-205ENST00000585790 367 ntBASIC17.21■□□□□ 0.35
CNTNAP3Q9BZ76 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.21■□□□□ 0.35
CNTNAP3Q9BZ76 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.21■□□□□ 0.35
CNTNAP3Q9BZ76 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNTNAP3Q9BZ76 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNTNAP3Q9BZ76 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CNTNAP3Q9BZ76 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNTNAP3Q9BZ76 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNTNAP3Q9BZ76 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNTNAP3Q9BZ76 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
CNTNAP3Q9BZ76 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
CNTNAP3Q9BZ76 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CNTNAP3Q9BZ76 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.21■□□□□ 0.34
CNTNAP3Q9BZ76 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CNTNAP3Q9BZ76 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CNTNAP3Q9BZ76 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNTNAP3Q9BZ76 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNTNAP3Q9BZ76 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNTNAP3Q9BZ76 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CNTNAP3Q9BZ76 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CNTNAP3Q9BZ76 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CNTNAP3Q9BZ76 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.2■□□□□ 0.34
CNTNAP3Q9BZ76 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.2■□□□□ 0.34
CNTNAP3Q9BZ76 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.2■□□□□ 0.34
CNTNAP3Q9BZ76 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.2■□□□□ 0.34
CNTNAP3Q9BZ76 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.2■□□□□ 0.34
CNTNAP3Q9BZ76 AC004835.2-201ENST00000603762 682 ntBASIC17.2■□□□□ 0.34
CNTNAP3Q9BZ76 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CNTNAP3Q9BZ76 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
CNTNAP3Q9BZ76 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNTNAP3Q9BZ76 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
CNTNAP3Q9BZ76 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNTNAP3Q9BZ76 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNTNAP3Q9BZ76 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNTNAP3Q9BZ76 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 PLK5-205ENST00000642079 1969 ntBASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 AC087289.5-201ENST00000586076 3175 ntBASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CNTNAP3Q9BZ76 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms