Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM54Q9BYV2 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM54Q9BYV2 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM54Q9BYV2 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TRIM54Q9BYV2 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM54Q9BYV2 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM54Q9BYV2 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM54Q9BYV2 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM54Q9BYV2 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM54Q9BYV2 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM54Q9BYV2 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM54Q9BYV2 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM54Q9BYV2 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM54Q9BYV2 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM54Q9BYV2 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM54Q9BYV2 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM54Q9BYV2 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM54Q9BYV2 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM54Q9BYV2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
TRIM54Q9BYV2 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM54Q9BYV2 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM54Q9BYV2 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.91■□□□□ 0.46
TRIM54Q9BYV2 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM54Q9BYV2 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
TRIM54Q9BYV2 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM54Q9BYV2 SEC1P-202ENST00000473944 940 ntBASIC17.91■□□□□ 0.46
TRIM54Q9BYV2 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.91■□□□□ 0.46
TRIM54Q9BYV2 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM54Q9BYV2 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM54Q9BYV2 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM54Q9BYV2 AC140113.3-201ENST00000605663 199 ntBASIC17.91■□□□□ 0.46
TRIM54Q9BYV2 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM54Q9BYV2 AC141257.4-201ENST00000634557 245 ntBASIC17.91■□□□□ 0.46
TRIM54Q9BYV2 AC136944.6-201ENST00000634818 245 ntBASIC17.91■□□□□ 0.46
TRIM54Q9BYV2 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.91■□□□□ 0.46
TRIM54Q9BYV2 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.91■□□□□ 0.46
TRIM54Q9BYV2 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TRIM54Q9BYV2 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.91■□□□□ 0.46
TRIM54Q9BYV2 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.91■□□□□ 0.46
TRIM54Q9BYV2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM54Q9BYV2 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TRIM54Q9BYV2 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM54Q9BYV2 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM54Q9BYV2 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM54Q9BYV2 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM54Q9BYV2 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
TRIM54Q9BYV2 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.9■□□□□ 0.46
TRIM54Q9BYV2 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.9■□□□□ 0.46
TRIM54Q9BYV2 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM54Q9BYV2 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM54Q9BYV2 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM54Q9BYV2 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.9■□□□□ 0.46
TRIM54Q9BYV2 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM54Q9BYV2 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
TRIM54Q9BYV2 SLC25A3P1-201ENST00000443844 931 ntBASIC17.9■□□□□ 0.46
TRIM54Q9BYV2 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.9■□□□□ 0.46
TRIM54Q9BYV2 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.9■□□□□ 0.46
TRIM54Q9BYV2 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM54Q9BYV2 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.9■□□□□ 0.46
TRIM54Q9BYV2 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.9■□□□□ 0.46
TRIM54Q9BYV2 AL031432.5-201ENST00000641059 760 ntBASIC17.9■□□□□ 0.46
TRIM54Q9BYV2 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM54Q9BYV2 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM54Q9BYV2 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM54Q9BYV2 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM54Q9BYV2 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM54Q9BYV2 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM54Q9BYV2 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.9■□□□□ 0.46
TRIM54Q9BYV2 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TRIM54Q9BYV2 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM54Q9BYV2 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.9■□□□□ 0.46
TRIM54Q9BYV2 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM54Q9BYV2 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM54Q9BYV2 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TRIM54Q9BYV2 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM54Q9BYV2 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRIM54Q9BYV2 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRIM54Q9BYV2 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
TRIM54Q9BYV2 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
TRIM54Q9BYV2 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRIM54Q9BYV2 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRIM54Q9BYV2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM54Q9BYV2 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM54Q9BYV2 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TRIM54Q9BYV2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM54Q9BYV2 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TRIM54Q9BYV2 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TRIM54Q9BYV2 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM54Q9BYV2 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM54Q9BYV2 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM54Q9BYV2 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM54Q9BYV2 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.89■□□□□ 0.45
TRIM54Q9BYV2 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM54Q9BYV2 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.89■□□□□ 0.45
TRIM54Q9BYV2 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM54Q9BYV2 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.89■□□□□ 0.45
TRIM54Q9BYV2 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM54Q9BYV2 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
TRIM54Q9BYV2 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM54Q9BYV2 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms