Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.97■□□□□ 0.47
LRFN3Q9BTN0 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRFN3Q9BTN0 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.97■□□□□ 0.47
LRFN3Q9BTN0 SPDYE21P-201ENST00000413323 827 ntBASIC17.97■□□□□ 0.47
LRFN3Q9BTN0 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.97■□□□□ 0.47
LRFN3Q9BTN0 AC005237.2-201ENST00000434368 219 ntBASIC17.97■□□□□ 0.47
LRFN3Q9BTN0 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.97■□□□□ 0.47
LRFN3Q9BTN0 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.97■□□□□ 0.47
LRFN3Q9BTN0 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRFN3Q9BTN0 AC069335.1-201ENST00000489972 472 ntBASIC17.97■□□□□ 0.47
LRFN3Q9BTN0 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.97■□□□□ 0.47
LRFN3Q9BTN0 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.97■□□□□ 0.47
LRFN3Q9BTN0 AC010336.2-201ENST00000564226 506 ntBASIC17.97■□□□□ 0.47
LRFN3Q9BTN0 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.97■□□□□ 0.47
LRFN3Q9BTN0 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRFN3Q9BTN0 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.97■□□□□ 0.47
LRFN3Q9BTN0 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.97■□□□□ 0.47
LRFN3Q9BTN0 AC017083.2-201ENST00000608069 979 ntBASIC17.97■□□□□ 0.47
LRFN3Q9BTN0 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRFN3Q9BTN0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.97■□□□□ 0.47
LRFN3Q9BTN0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRFN3Q9BTN0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRFN3Q9BTN0 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRFN3Q9BTN0 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRFN3Q9BTN0 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRFN3Q9BTN0 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.97■□□□□ 0.47
LRFN3Q9BTN0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.97■□□□□ 0.47
LRFN3Q9BTN0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRFN3Q9BTN0 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
LRFN3Q9BTN0 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRFN3Q9BTN0 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRFN3Q9BTN0 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRFN3Q9BTN0 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRFN3Q9BTN0 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRFN3Q9BTN0 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRFN3Q9BTN0 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRFN3Q9BTN0 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.96■□□□□ 0.47
LRFN3Q9BTN0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.96■□□□□ 0.47
LRFN3Q9BTN0 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.96■□□□□ 0.47
LRFN3Q9BTN0 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRFN3Q9BTN0 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRFN3Q9BTN0 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRFN3Q9BTN0 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRFN3Q9BTN0 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRFN3Q9BTN0 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.96■□□□□ 0.47
LRFN3Q9BTN0 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.96■□□□□ 0.47
LRFN3Q9BTN0 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.96■□□□□ 0.47
LRFN3Q9BTN0 AC125807.1-201ENST00000483097 614 ntBASIC17.96■□□□□ 0.47
LRFN3Q9BTN0 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.96■□□□□ 0.47
LRFN3Q9BTN0 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.96■□□□□ 0.47
LRFN3Q9BTN0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
LRFN3Q9BTN0 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRFN3Q9BTN0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRFN3Q9BTN0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.96■□□□□ 0.46
LRFN3Q9BTN0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRFN3Q9BTN0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRFN3Q9BTN0 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRFN3Q9BTN0 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRFN3Q9BTN0 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRFN3Q9BTN0 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRFN3Q9BTN0 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.95■□□□□ 0.46
LRFN3Q9BTN0 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.95■□□□□ 0.46
LRFN3Q9BTN0 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRFN3Q9BTN0 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.95■□□□□ 0.46
LRFN3Q9BTN0 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.95■□□□□ 0.46
LRFN3Q9BTN0 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.95■□□□□ 0.46
LRFN3Q9BTN0 AC140878.1-201ENST00000565277 250 ntBASIC17.95■□□□□ 0.46
LRFN3Q9BTN0 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.95■□□□□ 0.46
LRFN3Q9BTN0 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.95■□□□□ 0.46
LRFN3Q9BTN0 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.95■□□□□ 0.46
LRFN3Q9BTN0 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRFN3Q9BTN0 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRFN3Q9BTN0 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
LRFN3Q9BTN0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
LRFN3Q9BTN0 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRFN3Q9BTN0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRFN3Q9BTN0 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.95■□□□□ 0.46
LRFN3Q9BTN0 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRFN3Q9BTN0 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
LRFN3Q9BTN0 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
LRFN3Q9BTN0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRFN3Q9BTN0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRFN3Q9BTN0 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.94■□□□□ 0.46
LRFN3Q9BTN0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRFN3Q9BTN0 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRFN3Q9BTN0 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRFN3Q9BTN0 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRFN3Q9BTN0 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
LRFN3Q9BTN0 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
LRFN3Q9BTN0 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRFN3Q9BTN0 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRFN3Q9BTN0 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRFN3Q9BTN0 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.94■□□□□ 0.46
LRFN3Q9BTN0 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.94■□□□□ 0.46
LRFN3Q9BTN0 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.94■□□□□ 0.46
LRFN3Q9BTN0 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.94■□□□□ 0.46
LRFN3Q9BTN0 AC092658.1-201ENST00000505836 891 ntBASIC17.94■□□□□ 0.46
LRFN3Q9BTN0 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.94■□□□□ 0.46
LRFN3Q9BTN0 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.94■□□□□ 0.46
LRFN3Q9BTN0 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms