Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
VPS25Q9BRG1 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VPS25Q9BRG1 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC12.65□□□□□ -0.38
VPS25Q9BRG1 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC12.65□□□□□ -0.38
VPS25Q9BRG1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VPS25Q9BRG1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
VPS25Q9BRG1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VPS25Q9BRG1 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
VPS25Q9BRG1 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
VPS25Q9BRG1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC12.65□□□□□ -0.38
VPS25Q9BRG1 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
VPS25Q9BRG1 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VPS25Q9BRG1 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VPS25Q9BRG1 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VPS25Q9BRG1 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VPS25Q9BRG1 AL603756.1-201ENST00000606511 2163 ntBASIC12.65□□□□□ -0.38
VPS25Q9BRG1 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VPS25Q9BRG1 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VPS25Q9BRG1 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VPS25Q9BRG1 AC139795.1-202ENST00000500444 432 ntBASIC12.65□□□□□ -0.38
VPS25Q9BRG1 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VPS25Q9BRG1 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VPS25Q9BRG1 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
VPS25Q9BRG1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC12.65□□□□□ -0.38
VPS25Q9BRG1 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.65□□□□□ -0.38
VPS25Q9BRG1 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VPS25Q9BRG1 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VPS25Q9BRG1 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
VPS25Q9BRG1 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
VPS25Q9BRG1 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VPS25Q9BRG1 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC12.65□□□□□ -0.38
VPS25Q9BRG1 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VPS25Q9BRG1 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
VPS25Q9BRG1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC12.65□□□□□ -0.38
VPS25Q9BRG1 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC12.65□□□□□ -0.38
VPS25Q9BRG1 AL023806.1-201ENST00000603994 1649 ntBASIC12.65□□□□□ -0.38
VPS25Q9BRG1 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC12.65□□□□□ -0.38
VPS25Q9BRG1 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VPS25Q9BRG1 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
VPS25Q9BRG1 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VPS25Q9BRG1 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
VPS25Q9BRG1 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC12.65□□□□□ -0.39
VPS25Q9BRG1 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
VPS25Q9BRG1 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.39
VPS25Q9BRG1 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
VPS25Q9BRG1 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
VPS25Q9BRG1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
VPS25Q9BRG1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
VPS25Q9BRG1 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
VPS25Q9BRG1 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC12.65□□□□□ -0.39
VPS25Q9BRG1 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 ABHD17AP4-201ENST00000411545 909 ntBASIC12.64□□□□□ -0.39
VPS25Q9BRG1 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 AC138035.3-201ENST00000622706 2791 ntBASIC12.64□□□□□ -0.39
VPS25Q9BRG1 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS25Q9BRG1 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms