Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.68■□□□□ 0.42
CFAP54Q96N23 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CFAP54Q96N23 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CFAP54Q96N23 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.68■□□□□ 0.42
CFAP54Q96N23 AC011467.2-201ENST00000598425 242 ntBASIC17.68■□□□□ 0.42
CFAP54Q96N23 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.67■□□□□ 0.42
CFAP54Q96N23 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.67■□□□□ 0.42
CFAP54Q96N23 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.67■□□□□ 0.42
CFAP54Q96N23 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
CFAP54Q96N23 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.67■□□□□ 0.42
CFAP54Q96N23 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CFAP54Q96N23 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.67■□□□□ 0.42
CFAP54Q96N23 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.67■□□□□ 0.42
CFAP54Q96N23 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.67■□□□□ 0.42
CFAP54Q96N23 AL596325.1-201ENST00000563991 1082 ntBASIC17.67■□□□□ 0.42
CFAP54Q96N23 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.67■□□□□ 0.42
CFAP54Q96N23 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
CFAP54Q96N23 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.67■□□□□ 0.42
CFAP54Q96N23 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CFAP54Q96N23 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CFAP54Q96N23 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CFAP54Q96N23 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CFAP54Q96N23 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.67■□□□□ 0.42
CFAP54Q96N23 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CFAP54Q96N23 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CFAP54Q96N23 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CFAP54Q96N23 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.67■□□□□ 0.42
CFAP54Q96N23 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CFAP54Q96N23 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CFAP54Q96N23 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CFAP54Q96N23 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CFAP54Q96N23 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CFAP54Q96N23 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.66■□□□□ 0.42
CFAP54Q96N23 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
CFAP54Q96N23 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP54Q96N23 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.66■□□□□ 0.42
CFAP54Q96N23 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CFAP54Q96N23 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.66■□□□□ 0.42
CFAP54Q96N23 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP54Q96N23 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP54Q96N23 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP54Q96N23 LINC01126-201ENST00000623515 1646 ntBASIC17.66■□□□□ 0.42
CFAP54Q96N23 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP54Q96N23 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP54Q96N23 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.66■□□□□ 0.42
CFAP54Q96N23 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.66■□□□□ 0.42
CFAP54Q96N23 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP54Q96N23 AC055876.3-201ENST00000431496 288 ntBASIC17.66■□□□□ 0.42
CFAP54Q96N23 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.66■□□□□ 0.42
CFAP54Q96N23 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP54Q96N23 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP54Q96N23 AC138649.4-201ENST00000612222 287 ntBASIC17.66■□□□□ 0.42
CFAP54Q96N23 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CFAP54Q96N23 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.66■□□□□ 0.42
CFAP54Q96N23 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.66■□□□□ 0.42
CFAP54Q96N23 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP54Q96N23 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
CFAP54Q96N23 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CFAP54Q96N23 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.66■□□□□ 0.42
CFAP54Q96N23 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.66■□□□□ 0.42
CFAP54Q96N23 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.66■□□□□ 0.42
CFAP54Q96N23 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP54Q96N23 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP54Q96N23 AC116407.2-201ENST00000613639 860 ntBASIC17.66■□□□□ 0.42
CFAP54Q96N23 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CFAP54Q96N23 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CFAP54Q96N23 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CFAP54Q96N23 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CFAP54Q96N23 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CFAP54Q96N23 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CFAP54Q96N23 AC112777.1-201ENST00000540175 1423 ntBASIC17.65■□□□□ 0.42
CFAP54Q96N23 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CFAP54Q96N23 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CFAP54Q96N23 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.65■□□□□ 0.42
CFAP54Q96N23 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CFAP54Q96N23 AC005593.1-201ENST00000624894 515 ntBASIC17.65■□□□□ 0.42
CFAP54Q96N23 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.65■□□□□ 0.42
CFAP54Q96N23 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CFAP54Q96N23 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CFAP54Q96N23 ZNF815P-204ENST00000434898 1737 ntBASIC17.65■□□□□ 0.42
CFAP54Q96N23 AC034236.2-201ENST00000606662 1610 ntBASIC17.65■□□□□ 0.42
CFAP54Q96N23 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CFAP54Q96N23 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CFAP54Q96N23 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CFAP54Q96N23 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CFAP54Q96N23 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CFAP54Q96N23 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CFAP54Q96N23 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CFAP54Q96N23 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CFAP54Q96N23 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CFAP54Q96N23 AC004461.1-201ENST00000412461 403 ntBASIC17.65■□□□□ 0.42
CFAP54Q96N23 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.65■□□□□ 0.42
CFAP54Q96N23 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.65■□□□□ 0.42
CFAP54Q96N23 VN2R19P-201ENST00000442399 1052 ntBASIC17.65■□□□□ 0.42
CFAP54Q96N23 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CFAP54Q96N23 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CFAP54Q96N23 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CFAP54Q96N23 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.65■□□□□ 0.42
CFAP54Q96N23 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CFAP54Q96N23 FAM86GP-201ENST00000448322 971 ntBASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms