Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
NSMCE2Q96MF7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.13■□□□□ 0.33
NSMCE2Q96MF7 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NSMCE2Q96MF7 FAM207BP-201ENST00000447172 505 ntBASIC17.13■□□□□ 0.33
NSMCE2Q96MF7 AP002982.1-201ENST00000492365 877 ntBASIC17.13■□□□□ 0.33
NSMCE2Q96MF7 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
NSMCE2Q96MF7 AP003097.1-201ENST00000530657 1135 ntBASIC17.13■□□□□ 0.33
NSMCE2Q96MF7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.13■□□□□ 0.33
NSMCE2Q96MF7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NSMCE2Q96MF7 AC008622.2-201ENST00000617006 1229 ntBASIC17.13■□□□□ 0.33
NSMCE2Q96MF7 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.13■□□□□ 0.33
NSMCE2Q96MF7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.13■□□□□ 0.33
NSMCE2Q96MF7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NSMCE2Q96MF7 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
NSMCE2Q96MF7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NSMCE2Q96MF7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NSMCE2Q96MF7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
NSMCE2Q96MF7 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NSMCE2Q96MF7 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NSMCE2Q96MF7 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NSMCE2Q96MF7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
NSMCE2Q96MF7 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.13■□□□□ 0.33
NSMCE2Q96MF7 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.13■□□□□ 0.33
NSMCE2Q96MF7 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NSMCE2Q96MF7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NSMCE2Q96MF7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NSMCE2Q96MF7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NSMCE2Q96MF7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
NSMCE2Q96MF7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NSMCE2Q96MF7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NSMCE2Q96MF7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NSMCE2Q96MF7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NSMCE2Q96MF7 AC009102.3-201ENST00000623118 1491 ntBASIC17.12■□□□□ 0.33
NSMCE2Q96MF7 AP001094.4-201ENST00000579008 2176 ntBASIC17.12■□□□□ 0.33
NSMCE2Q96MF7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.12■□□□□ 0.33
NSMCE2Q96MF7 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NSMCE2Q96MF7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.12■□□□□ 0.33
NSMCE2Q96MF7 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NSMCE2Q96MF7 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
NSMCE2Q96MF7 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
NSMCE2Q96MF7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NSMCE2Q96MF7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NSMCE2Q96MF7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
NSMCE2Q96MF7 AL023284.2-201ENST00000405850 579 ntBASIC17.12■□□□□ 0.33
NSMCE2Q96MF7 KSR1P1-201ENST00000446298 240 ntBASIC17.12■□□□□ 0.33
NSMCE2Q96MF7 RPS2P4-201ENST00000476944 856 ntBASIC17.12■□□□□ 0.33
NSMCE2Q96MF7 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.12■□□□□ 0.33
NSMCE2Q96MF7 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
NSMCE2Q96MF7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NSMCE2Q96MF7 AC233263.1-201ENST00000578059 224 ntBASIC17.12■□□□□ 0.33
NSMCE2Q96MF7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
NSMCE2Q96MF7 AL109923.1-201ENST00000618799 583 ntBASIC17.12■□□□□ 0.33
NSMCE2Q96MF7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NSMCE2Q96MF7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NSMCE2Q96MF7 SDHAP2-201ENST00000455183 2001 ntBASIC17.12■□□□□ 0.33
NSMCE2Q96MF7 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NSMCE2Q96MF7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NSMCE2Q96MF7 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
NSMCE2Q96MF7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NSMCE2Q96MF7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.12■□□□□ 0.33
NSMCE2Q96MF7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NSMCE2Q96MF7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NSMCE2Q96MF7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.12■□□□□ 0.33
NSMCE2Q96MF7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NSMCE2Q96MF7 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NSMCE2Q96MF7 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NSMCE2Q96MF7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NSMCE2Q96MF7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NSMCE2Q96MF7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
NSMCE2Q96MF7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.11■□□□□ 0.33
NSMCE2Q96MF7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.11■□□□□ 0.33
NSMCE2Q96MF7 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NSMCE2Q96MF7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
NSMCE2Q96MF7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NSMCE2Q96MF7 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.11■□□□□ 0.33
NSMCE2Q96MF7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
NSMCE2Q96MF7 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NSMCE2Q96MF7 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NSMCE2Q96MF7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NSMCE2Q96MF7 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.11■□□□□ 0.33
NSMCE2Q96MF7 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.11■□□□□ 0.33
NSMCE2Q96MF7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.11■□□□□ 0.33
NSMCE2Q96MF7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.11■□□□□ 0.33
NSMCE2Q96MF7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.11■□□□□ 0.33
NSMCE2Q96MF7 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NSMCE2Q96MF7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NSMCE2Q96MF7 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
NSMCE2Q96MF7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.11■□□□□ 0.33
NSMCE2Q96MF7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NSMCE2Q96MF7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.11■□□□□ 0.33
NSMCE2Q96MF7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
NSMCE2Q96MF7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NSMCE2Q96MF7 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NSMCE2Q96MF7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
NSMCE2Q96MF7 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NSMCE2Q96MF7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.11■□□□□ 0.33
NSMCE2Q96MF7 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.11■□□□□ 0.33
NSMCE2Q96MF7 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NSMCE2Q96MF7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.11■□□□□ 0.33
NSMCE2Q96MF7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms