Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC23.77■■□□□ 1.4
NBPF4Q96M43 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC23.77■■□□□ 1.4
NBPF4Q96M43 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC23.77■■□□□ 1.4
NBPF4Q96M43 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC23.77■■□□□ 1.4
NBPF4Q96M43 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC23.77■■□□□ 1.4
NBPF4Q96M43 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC23.77■■□□□ 1.4
NBPF4Q96M43 AC027601.4-201ENST00000611259 610 ntBASIC23.77■■□□□ 1.4
NBPF4Q96M43 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC23.77■■□□□ 1.4
NBPF4Q96M43 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC23.77■■□□□ 1.4
NBPF4Q96M43 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NBPF4Q96M43 AC010460.3-201ENST00000511359 1579 ntBASIC23.77■■□□□ 1.4
NBPF4Q96M43 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NBPF4Q96M43 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
NBPF4Q96M43 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC23.76■■□□□ 1.39
NBPF4Q96M43 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NBPF4Q96M43 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC23.76■■□□□ 1.39
NBPF4Q96M43 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NBPF4Q96M43 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NBPF4Q96M43 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
NBPF4Q96M43 AL031598.1-201ENST00000561511 1773 ntBASIC23.76■■□□□ 1.39
NBPF4Q96M43 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NBPF4Q96M43 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
NBPF4Q96M43 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC23.76■■□□□ 1.39
NBPF4Q96M43 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC23.76■■□□□ 1.39
NBPF4Q96M43 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
NBPF4Q96M43 Z83851.2-201ENST00000609564 659 ntBASIC23.76■■□□□ 1.39
NBPF4Q96M43 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NBPF4Q96M43 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
NBPF4Q96M43 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NBPF4Q96M43 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NBPF4Q96M43 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC23.76■■□□□ 1.39
NBPF4Q96M43 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC23.76■■□□□ 1.39
NBPF4Q96M43 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
NBPF4Q96M43 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC23.75■■□□□ 1.39
NBPF4Q96M43 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
NBPF4Q96M43 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
NBPF4Q96M43 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NBPF4Q96M43 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NBPF4Q96M43 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NBPF4Q96M43 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC23.75■■□□□ 1.39
NBPF4Q96M43 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NBPF4Q96M43 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
NBPF4Q96M43 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC23.75■■□□□ 1.39
NBPF4Q96M43 AC092183.1-201ENST00000469884 875 ntBASIC23.75■■□□□ 1.39
NBPF4Q96M43 NMU-202ENST00000505262 693 ntTSL 3 BASIC23.75■■□□□ 1.39
NBPF4Q96M43 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC23.75■■□□□ 1.39
NBPF4Q96M43 RNF151-202ENST00000569210 853 ntTSL 2 BASIC23.75■■□□□ 1.39
NBPF4Q96M43 FAM197Y3-203ENST00000618346 717 ntBASIC23.75■■□□□ 1.39
NBPF4Q96M43 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NBPF4Q96M43 AC055717.3-201ENST00000622967 595 ntBASIC23.75■■□□□ 1.39
NBPF4Q96M43 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC23.75■■□□□ 1.39
NBPF4Q96M43 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC23.75■■□□□ 1.39
NBPF4Q96M43 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NBPF4Q96M43 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NBPF4Q96M43 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NBPF4Q96M43 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NBPF4Q96M43 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NBPF4Q96M43 PMPCAP1-201ENST00000508114 1576 ntBASIC23.74■■□□□ 1.39
NBPF4Q96M43 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NBPF4Q96M43 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NBPF4Q96M43 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
NBPF4Q96M43 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NBPF4Q96M43 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC23.74■■□□□ 1.39
NBPF4Q96M43 AC096633.1-201ENST00000422446 749 ntBASIC23.74■■□□□ 1.39
NBPF4Q96M43 SRP19-202ENST00000445150 833 ntTSL 2 BASIC23.74■■□□□ 1.39
NBPF4Q96M43 BX005266.1-201ENST00000473402 457 ntBASIC23.74■■□□□ 1.39
NBPF4Q96M43 UNC93B6-202ENST00000528242 690 ntBASIC23.74■■□□□ 1.39
NBPF4Q96M43 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC23.74■■□□□ 1.39
NBPF4Q96M43 AC105339.3-201ENST00000560043 636 ntBASIC23.74■■□□□ 1.39
NBPF4Q96M43 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC23.74■■□□□ 1.39
NBPF4Q96M43 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
NBPF4Q96M43 CAND2-206ENST00000626378 333 ntTSL 5 BASIC23.74■■□□□ 1.39
NBPF4Q96M43 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NBPF4Q96M43 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NBPF4Q96M43 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC23.74■■□□□ 1.39
NBPF4Q96M43 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC23.74■■□□□ 1.39
NBPF4Q96M43 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC23.74■■□□□ 1.39
NBPF4Q96M43 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NBPF4Q96M43 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
NBPF4Q96M43 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NBPF4Q96M43 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
NBPF4Q96M43 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
NBPF4Q96M43 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC23.73■■□□□ 1.39
NBPF4Q96M43 MED15P5-201ENST00000423150 992 ntBASIC23.73■■□□□ 1.39
NBPF4Q96M43 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC23.73■■□□□ 1.39
NBPF4Q96M43 AC005104.2-201ENST00000427818 678 ntBASIC23.73■■□□□ 1.39
NBPF4Q96M43 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC23.73■■□□□ 1.39
NBPF4Q96M43 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC23.73■■□□□ 1.39
NBPF4Q96M43 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC23.73■■□□□ 1.39
NBPF4Q96M43 AC004817.3-201ENST00000602957 2129 ntBASIC23.73■■□□□ 1.39
NBPF4Q96M43 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NBPF4Q96M43 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
NBPF4Q96M43 KRT8P47-201ENST00000604727 1398 ntBASIC23.73■■□□□ 1.39
NBPF4Q96M43 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC23.73■■□□□ 1.39
NBPF4Q96M43 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC23.73■■□□□ 1.39
NBPF4Q96M43 TBC1D3P5-201ENST00000579401 1545 ntBASIC23.73■■□□□ 1.39
NBPF4Q96M43 AC079776.2-201ENST00000641154 1609 ntBASIC23.73■■□□□ 1.39
NBPF4Q96M43 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
NBPF4Q96M43 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
NBPF4Q96M43 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms