Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ALPK3Q96L96 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.62■□□□□ 0.73
ALPK3Q96L96 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ALPK3Q96L96 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ALPK3Q96L96 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ALPK3Q96L96 LINC00602-201ENST00000629776 2065 ntBASIC19.62■□□□□ 0.73
ALPK3Q96L96 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ALPK3Q96L96 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ALPK3Q96L96 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.62■□□□□ 0.73
ALPK3Q96L96 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.62■□□□□ 0.73
ALPK3Q96L96 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.62■□□□□ 0.73
ALPK3Q96L96 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.62■□□□□ 0.73
ALPK3Q96L96 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.62■□□□□ 0.73
ALPK3Q96L96 RHOQP3-201ENST00000437982 621 ntBASIC19.62■□□□□ 0.73
ALPK3Q96L96 VN2R19P-201ENST00000442399 1052 ntBASIC19.62■□□□□ 0.73
ALPK3Q96L96 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ALPK3Q96L96 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.62■□□□□ 0.73
ALPK3Q96L96 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.62■□□□□ 0.73
ALPK3Q96L96 RPS15P9-201ENST00000494093 319 ntBASIC19.62■□□□□ 0.73
ALPK3Q96L96 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ALPK3Q96L96 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ALPK3Q96L96 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ALPK3Q96L96 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ALPK3Q96L96 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ALPK3Q96L96 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ALPK3Q96L96 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
ALPK3Q96L96 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ALPK3Q96L96 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ALPK3Q96L96 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
ALPK3Q96L96 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
ALPK3Q96L96 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.61■□□□□ 0.73
ALPK3Q96L96 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.61■□□□□ 0.73
ALPK3Q96L96 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ALPK3Q96L96 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ALPK3Q96L96 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ALPK3Q96L96 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ALPK3Q96L96 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ALPK3Q96L96 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
ALPK3Q96L96 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.61■□□□□ 0.73
ALPK3Q96L96 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
ALPK3Q96L96 LINC01126-201ENST00000623515 1646 ntBASIC19.61■□□□□ 0.73
ALPK3Q96L96 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ALPK3Q96L96 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ALPK3Q96L96 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.61■□□□□ 0.73
ALPK3Q96L96 AC002472.2-201ENST00000442739 958 ntBASIC19.61■□□□□ 0.73
ALPK3Q96L96 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.61■□□□□ 0.73
ALPK3Q96L96 AC004706.3-202ENST00000621574 984 ntBASIC19.61■□□□□ 0.73
ALPK3Q96L96 AC004790.2-201ENST00000623588 572 ntBASIC19.61■□□□□ 0.73
ALPK3Q96L96 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ALPK3Q96L96 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ALPK3Q96L96 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ALPK3Q96L96 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ALPK3Q96L96 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.6■□□□□ 0.73
ALPK3Q96L96 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.6■□□□□ 0.73
ALPK3Q96L96 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ALPK3Q96L96 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ALPK3Q96L96 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ALPK3Q96L96 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ALPK3Q96L96 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
ALPK3Q96L96 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ALPK3Q96L96 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.6■□□□□ 0.73
ALPK3Q96L96 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.6■□□□□ 0.73
ALPK3Q96L96 YTHDF3-AS1-201ENST00000603538 718 ntBASIC19.6■□□□□ 0.73
ALPK3Q96L96 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ALPK3Q96L96 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.6■□□□□ 0.73
ALPK3Q96L96 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ALPK3Q96L96 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ALPK3Q96L96 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ALPK3Q96L96 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
ALPK3Q96L96 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ALPK3Q96L96 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ALPK3Q96L96 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ALPK3Q96L96 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.59■□□□□ 0.73
ALPK3Q96L96 SPDYE21P-201ENST00000413323 827 ntBASIC19.59■□□□□ 0.73
ALPK3Q96L96 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.59■□□□□ 0.73
ALPK3Q96L96 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.59■□□□□ 0.73
ALPK3Q96L96 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.59■□□□□ 0.73
ALPK3Q96L96 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.59■□□□□ 0.73
ALPK3Q96L96 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
ALPK3Q96L96 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
ALPK3Q96L96 KRT8P47-201ENST00000604727 1398 ntBASIC19.59■□□□□ 0.73
ALPK3Q96L96 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
ALPK3Q96L96 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.59■□□□□ 0.73
ALPK3Q96L96 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ALPK3Q96L96 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.59■□□□□ 0.73
ALPK3Q96L96 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.59■□□□□ 0.73
ALPK3Q96L96 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ALPK3Q96L96 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ALPK3Q96L96 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
ALPK3Q96L96 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ALPK3Q96L96 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ALPK3Q96L96 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
ALPK3Q96L96 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.59■□□□□ 0.73
ALPK3Q96L96 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ALPK3Q96L96 AC096633.1-201ENST00000422446 749 ntBASIC19.59■□□□□ 0.73
ALPK3Q96L96 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.59■□□□□ 0.73
ALPK3Q96L96 AL805961.1-202ENST00000641562 540 ntBASIC19.59■□□□□ 0.73
ALPK3Q96L96 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ALPK3Q96L96 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
ALPK3Q96L96 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms