Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRCH3Q96II8 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRCH3Q96II8 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.55■□□□□ 0.72
LRCH3Q96II8 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
LRCH3Q96II8 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRCH3Q96II8 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.54■□□□□ 0.72
LRCH3Q96II8 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRCH3Q96II8 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.54■□□□□ 0.72
LRCH3Q96II8 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRCH3Q96II8 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRCH3Q96II8 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.54■□□□□ 0.72
LRCH3Q96II8 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRCH3Q96II8 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
LRCH3Q96II8 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRCH3Q96II8 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
LRCH3Q96II8 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.54■□□□□ 0.72
LRCH3Q96II8 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRCH3Q96II8 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.54■□□□□ 0.72
LRCH3Q96II8 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRCH3Q96II8 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.54■□□□□ 0.72
LRCH3Q96II8 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.54■□□□□ 0.72
LRCH3Q96II8 AL390955.2-201ENST00000603032 514 ntBASIC19.54■□□□□ 0.72
LRCH3Q96II8 AL138831.2-201ENST00000606564 490 ntBASIC19.54■□□□□ 0.72
LRCH3Q96II8 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRCH3Q96II8 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.54■□□□□ 0.72
LRCH3Q96II8 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRCH3Q96II8 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
LRCH3Q96II8 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
LRCH3Q96II8 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRCH3Q96II8 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.54■□□□□ 0.72
LRCH3Q96II8 AC034236.2-201ENST00000606662 1610 ntBASIC19.54■□□□□ 0.72
LRCH3Q96II8 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.54■□□□□ 0.72
LRCH3Q96II8 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
LRCH3Q96II8 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRCH3Q96II8 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
LRCH3Q96II8 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRCH3Q96II8 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRCH3Q96II8 AC125437.2-201ENST00000625180 2167 ntBASIC19.53■□□□□ 0.72
LRCH3Q96II8 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRCH3Q96II8 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRCH3Q96II8 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRCH3Q96II8 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
LRCH3Q96II8 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.53■□□□□ 0.72
LRCH3Q96II8 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.53■□□□□ 0.72
LRCH3Q96II8 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRCH3Q96II8 KRT18P27-201ENST00000427733 1299 ntBASIC19.53■□□□□ 0.72
LRCH3Q96II8 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRCH3Q96II8 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.53■□□□□ 0.72
LRCH3Q96II8 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRCH3Q96II8 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.53■□□□□ 0.72
LRCH3Q96II8 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.53■□□□□ 0.72
LRCH3Q96II8 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
LRCH3Q96II8 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRCH3Q96II8 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRCH3Q96II8 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRCH3Q96II8 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.53■□□□□ 0.72
LRCH3Q96II8 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.53■□□□□ 0.72
LRCH3Q96II8 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRCH3Q96II8 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.52■□□□□ 0.72
LRCH3Q96II8 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRCH3Q96II8 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRCH3Q96II8 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.52■□□□□ 0.72
LRCH3Q96II8 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.52■□□□□ 0.72
LRCH3Q96II8 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.52■□□□□ 0.72
LRCH3Q96II8 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.52■□□□□ 0.72
LRCH3Q96II8 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.52■□□□□ 0.72
LRCH3Q96II8 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.52■□□□□ 0.72
LRCH3Q96II8 OR8S1-201ENST00000310194 1080 ntBASIC19.52■□□□□ 0.72
LRCH3Q96II8 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
LRCH3Q96II8 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC19.52■□□□□ 0.72
LRCH3Q96II8 AC236430.1-201ENST00000402231 743 ntBASIC19.52■□□□□ 0.72
LRCH3Q96II8 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRCH3Q96II8 PMS2P4-201ENST00000412466 1052 ntBASIC19.52■□□□□ 0.72
LRCH3Q96II8 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC19.52■□□□□ 0.72
LRCH3Q96II8 AP000344.2-201ENST00000512987 629 ntBASIC19.52■□□□□ 0.72
LRCH3Q96II8 AL359881.2-201ENST00000602973 570 ntBASIC19.52■□□□□ 0.72
LRCH3Q96II8 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRCH3Q96II8 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRCH3Q96II8 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC19.52■□□□□ 0.72
LRCH3Q96II8 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRCH3Q96II8 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRCH3Q96II8 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRCH3Q96II8 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRCH3Q96II8 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
LRCH3Q96II8 AC009237.14-201ENST00000609975 1594 ntBASIC19.52■□□□□ 0.71
LRCH3Q96II8 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
LRCH3Q96II8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.71
LRCH3Q96II8 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
LRCH3Q96II8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LRCH3Q96II8 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
LRCH3Q96II8 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.52■□□□□ 0.71
LRCH3Q96II8 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.52■□□□□ 0.71
LRCH3Q96II8 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRCH3Q96II8 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRCH3Q96II8 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.51■□□□□ 0.71
LRCH3Q96II8 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.51■□□□□ 0.71
LRCH3Q96II8 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRCH3Q96II8 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRCH3Q96II8 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRCH3Q96II8 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms