Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IFT43Q96FT9 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
IFT43Q96FT9 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
IFT43Q96FT9 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
IFT43Q96FT9 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
IFT43Q96FT9 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
IFT43Q96FT9 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
IFT43Q96FT9 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
IFT43Q96FT9 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.68■□□□□ 0.58
IFT43Q96FT9 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.68■□□□□ 0.58
IFT43Q96FT9 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IFT43Q96FT9 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IFT43Q96FT9 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
IFT43Q96FT9 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IFT43Q96FT9 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IFT43Q96FT9 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IFT43Q96FT9 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IFT43Q96FT9 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IFT43Q96FT9 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.68■□□□□ 0.58
IFT43Q96FT9 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.68■□□□□ 0.58
IFT43Q96FT9 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
IFT43Q96FT9 AC024243.1-201ENST00000609234 778 ntBASIC18.68■□□□□ 0.58
IFT43Q96FT9 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
IFT43Q96FT9 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
IFT43Q96FT9 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IFT43Q96FT9 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IFT43Q96FT9 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.68■□□□□ 0.58
IFT43Q96FT9 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
IFT43Q96FT9 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
IFT43Q96FT9 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
IFT43Q96FT9 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
IFT43Q96FT9 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IFT43Q96FT9 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.68■□□□□ 0.58
IFT43Q96FT9 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
IFT43Q96FT9 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.68■□□□□ 0.58
IFT43Q96FT9 PRORSD1P-202ENST00000563365 2154 ntBASIC18.68■□□□□ 0.58
IFT43Q96FT9 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IFT43Q96FT9 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
IFT43Q96FT9 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
IFT43Q96FT9 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.68■□□□□ 0.58
IFT43Q96FT9 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
IFT43Q96FT9 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IFT43Q96FT9 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IFT43Q96FT9 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
IFT43Q96FT9 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFT43Q96FT9 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IFT43Q96FT9 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.67■□□□□ 0.58
IFT43Q96FT9 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.67■□□□□ 0.58
IFT43Q96FT9 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFT43Q96FT9 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IFT43Q96FT9 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.67■□□□□ 0.58
IFT43Q96FT9 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.67■□□□□ 0.58
IFT43Q96FT9 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.67■□□□□ 0.58
IFT43Q96FT9 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFT43Q96FT9 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
IFT43Q96FT9 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.67■□□□□ 0.58
IFT43Q96FT9 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.67■□□□□ 0.58
IFT43Q96FT9 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IFT43Q96FT9 AC009065.1-201ENST00000564055 1225 ntBASIC18.67■□□□□ 0.58
IFT43Q96FT9 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
IFT43Q96FT9 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFT43Q96FT9 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFT43Q96FT9 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.67■□□□□ 0.58
IFT43Q96FT9 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.67■□□□□ 0.58
IFT43Q96FT9 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IFT43Q96FT9 AC106820.2-201ENST00000563775 3264 ntBASIC18.67■□□□□ 0.58
IFT43Q96FT9 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFT43Q96FT9 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFT43Q96FT9 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.67■□□□□ 0.58
IFT43Q96FT9 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFT43Q96FT9 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFT43Q96FT9 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IFT43Q96FT9 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFT43Q96FT9 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFT43Q96FT9 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFT43Q96FT9 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
IFT43Q96FT9 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
IFT43Q96FT9 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFT43Q96FT9 AC012313.1-201ENST00000593393 3059 ntBASIC18.66■□□□□ 0.58
IFT43Q96FT9 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
IFT43Q96FT9 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFT43Q96FT9 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.66■□□□□ 0.58
IFT43Q96FT9 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.66■□□□□ 0.58
IFT43Q96FT9 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
IFT43Q96FT9 AL163051.1-201ENST00000569214 1512 ntBASIC18.66■□□□□ 0.58
IFT43Q96FT9 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
IFT43Q96FT9 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFT43Q96FT9 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.66■□□□□ 0.58
IFT43Q96FT9 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFT43Q96FT9 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
IFT43Q96FT9 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
IFT43Q96FT9 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
IFT43Q96FT9 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.66■□□□□ 0.58
IFT43Q96FT9 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.66■□□□□ 0.58
IFT43Q96FT9 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.66■□□□□ 0.58
IFT43Q96FT9 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.66■□□□□ 0.58
IFT43Q96FT9 AC104390.1-201ENST00000555663 520 ntBASIC18.66■□□□□ 0.58
IFT43Q96FT9 AL136038.3-201ENST00000561909 1096 ntBASIC18.66■□□□□ 0.58
IFT43Q96FT9 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFT43Q96FT9 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms