Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 AC005082.1-201ENST00000413042 2259 ntBASIC18.13■□□□□ 0.49
SIPA1Q96FS4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SIPA1Q96FS4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.13■□□□□ 0.49
SIPA1Q96FS4 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.13■□□□□ 0.49
SIPA1Q96FS4 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.13■□□□□ 0.49
SIPA1Q96FS4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.13■□□□□ 0.49
SIPA1Q96FS4 RBM17P3-201ENST00000417687 1192 ntBASIC18.13■□□□□ 0.49
SIPA1Q96FS4 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.13■□□□□ 0.49
SIPA1Q96FS4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.13■□□□□ 0.49
SIPA1Q96FS4 AC093909.1-201ENST00000504731 1122 ntBASIC18.13■□□□□ 0.49
SIPA1Q96FS4 RNA5SP419-201ENST00000515908 135 ntBASIC18.13■□□□□ 0.49
SIPA1Q96FS4 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.13■□□□□ 0.49
SIPA1Q96FS4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.13■□□□□ 0.49
SIPA1Q96FS4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.13■□□□□ 0.49
SIPA1Q96FS4 MTDHP3-201ENST00000594186 672 ntBASIC18.13■□□□□ 0.49
SIPA1Q96FS4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SIPA1Q96FS4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.13■□□□□ 0.49
SIPA1Q96FS4 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SIPA1Q96FS4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SIPA1Q96FS4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SIPA1Q96FS4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SIPA1Q96FS4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SIPA1Q96FS4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SIPA1Q96FS4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.13■□□□□ 0.49
SIPA1Q96FS4 AC125634.1-201ENST00000438758 1403 ntBASIC18.13■□□□□ 0.49
SIPA1Q96FS4 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SIPA1Q96FS4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SIPA1Q96FS4 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SIPA1Q96FS4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
SIPA1Q96FS4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.12■□□□□ 0.49
SIPA1Q96FS4 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.12■□□□□ 0.49
SIPA1Q96FS4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SIPA1Q96FS4 ANO7L1-203ENST00000602586 1720 ntBASIC18.12■□□□□ 0.49
SIPA1Q96FS4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIPA1Q96FS4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
SIPA1Q96FS4 INTS4P1-201ENST00000438455 1935 ntBASIC18.12■□□□□ 0.49
SIPA1Q96FS4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIPA1Q96FS4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIPA1Q96FS4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SIPA1Q96FS4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.12■□□□□ 0.49
SIPA1Q96FS4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.12■□□□□ 0.49
SIPA1Q96FS4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.12■□□□□ 0.49
SIPA1Q96FS4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.12■□□□□ 0.49
SIPA1Q96FS4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SIPA1Q96FS4 IL9RP2-201ENST00000423948 1312 ntBASIC18.12■□□□□ 0.49
SIPA1Q96FS4 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIPA1Q96FS4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SIPA1Q96FS4 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SIPA1Q96FS4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIPA1Q96FS4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SIPA1Q96FS4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SIPA1Q96FS4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.12■□□□□ 0.49
SIPA1Q96FS4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.12■□□□□ 0.49
SIPA1Q96FS4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.12■□□□□ 0.49
SIPA1Q96FS4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.12■□□□□ 0.49
SIPA1Q96FS4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIPA1Q96FS4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIPA1Q96FS4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIPA1Q96FS4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
SIPA1Q96FS4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.11■□□□□ 0.49
SIPA1Q96FS4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SIPA1Q96FS4 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIPA1Q96FS4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SIPA1Q96FS4 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIPA1Q96FS4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.11■□□□□ 0.49
SIPA1Q96FS4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.11■□□□□ 0.49
SIPA1Q96FS4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.11■□□□□ 0.49
SIPA1Q96FS4 AC073648.2-201ENST00000510116 352 ntBASIC18.11■□□□□ 0.49
SIPA1Q96FS4 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.11■□□□□ 0.49
SIPA1Q96FS4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.11■□□□□ 0.49
SIPA1Q96FS4 AC011467.2-201ENST00000598425 242 ntBASIC18.11■□□□□ 0.49
SIPA1Q96FS4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIPA1Q96FS4 AC023511.2-201ENST00000618803 211 ntBASIC18.11■□□□□ 0.49
SIPA1Q96FS4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.11■□□□□ 0.49
SIPA1Q96FS4 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.11■□□□□ 0.49
SIPA1Q96FS4 AC148477.8-201ENST00000624298 468 ntBASIC18.11■□□□□ 0.49
SIPA1Q96FS4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIPA1Q96FS4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SIPA1Q96FS4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.11■□□□□ 0.49
SIPA1Q96FS4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SIPA1Q96FS4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIPA1Q96FS4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIPA1Q96FS4 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIPA1Q96FS4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIPA1Q96FS4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SIPA1Q96FS4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIPA1Q96FS4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SIPA1Q96FS4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIPA1Q96FS4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.11■□□□□ 0.49
SIPA1Q96FS4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIPA1Q96FS4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIPA1Q96FS4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIPA1Q96FS4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIPA1Q96FS4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIPA1Q96FS4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIPA1Q96FS4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIPA1Q96FS4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIPA1Q96FS4 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SIPA1Q96FS4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SIPA1Q96FS4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms