Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SHC3Q92529 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SHC3Q92529 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
SHC3Q92529 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SHC3Q92529 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SHC3Q92529 HBZP1-201ENST00000354915 429 ntBASIC19.33■□□□□ 0.68
SHC3Q92529 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.33■□□□□ 0.68
SHC3Q92529 AL359075.1-203ENST00000462729 1002 ntBASIC19.33■□□□□ 0.68
SHC3Q92529 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.33■□□□□ 0.68
SHC3Q92529 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.33■□□□□ 0.68
SHC3Q92529 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.33■□□□□ 0.68
SHC3Q92529 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.33■□□□□ 0.68
SHC3Q92529 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.33■□□□□ 0.68
SHC3Q92529 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SHC3Q92529 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.33■□□□□ 0.68
SHC3Q92529 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.33■□□□□ 0.68
SHC3Q92529 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SHC3Q92529 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
SHC3Q92529 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
SHC3Q92529 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
SHC3Q92529 AC100803.2-201ENST00000562459 1963 ntBASIC19.33■□□□□ 0.68
SHC3Q92529 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.33■□□□□ 0.68
SHC3Q92529 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SHC3Q92529 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SHC3Q92529 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHC3Q92529 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHC3Q92529 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.32■□□□□ 0.68
SHC3Q92529 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHC3Q92529 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHC3Q92529 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHC3Q92529 MIR662-201ENST00000384847 95 ntBASIC19.32■□□□□ 0.68
SHC3Q92529 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SHC3Q92529 FAM8A6P-201ENST00000407496 1135 ntBASIC19.32■□□□□ 0.68
SHC3Q92529 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.32■□□□□ 0.68
SHC3Q92529 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SHC3Q92529 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SHC3Q92529 AC063952.2-201ENST00000498792 1227 ntBASIC19.32■□□□□ 0.68
SHC3Q92529 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.32■□□□□ 0.68
SHC3Q92529 RN7SL850P-201ENST00000579959 291 ntBASIC19.32■□□□□ 0.68
SHC3Q92529 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SHC3Q92529 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.32■□□□□ 0.68
SHC3Q92529 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHC3Q92529 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHC3Q92529 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHC3Q92529 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHC3Q92529 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHC3Q92529 AC012317.2-201ENST00000623305 2251 ntBASIC19.32■□□□□ 0.68
SHC3Q92529 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.32■□□□□ 0.68
SHC3Q92529 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.32■□□□□ 0.68
SHC3Q92529 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHC3Q92529 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SHC3Q92529 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SHC3Q92529 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.32■□□□□ 0.68
SHC3Q92529 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.32■□□□□ 0.68
SHC3Q92529 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.32■□□□□ 0.68
SHC3Q92529 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
SHC3Q92529 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SHC3Q92529 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SHC3Q92529 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SHC3Q92529 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SHC3Q92529 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.31■□□□□ 0.68
SHC3Q92529 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.31■□□□□ 0.68
SHC3Q92529 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SHC3Q92529 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SHC3Q92529 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SHC3Q92529 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SHC3Q92529 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.31■□□□□ 0.68
SHC3Q92529 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SHC3Q92529 KRT18P48-201ENST00000434763 852 ntBASIC19.31■□□□□ 0.68
SHC3Q92529 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.31■□□□□ 0.68
SHC3Q92529 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.31■□□□□ 0.68
SHC3Q92529 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.31■□□□□ 0.68
SHC3Q92529 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.31■□□□□ 0.68
SHC3Q92529 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SHC3Q92529 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
SHC3Q92529 AC026471.1-201ENST00000564629 3026 ntBASIC19.31■□□□□ 0.68
SHC3Q92529 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
SHC3Q92529 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SHC3Q92529 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SHC3Q92529 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SHC3Q92529 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SHC3Q92529 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SHC3Q92529 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SHC3Q92529 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHC3Q92529 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SHC3Q92529 LETM1P2-201ENST00000597330 2178 ntBASIC19.3■□□□□ 0.68
SHC3Q92529 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.3■□□□□ 0.68
SHC3Q92529 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.3■□□□□ 0.68
SHC3Q92529 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SHC3Q92529 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHC3Q92529 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SHC3Q92529 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.3■□□□□ 0.68
SHC3Q92529 KRT18P65-201ENST00000439811 1286 ntBASIC19.3■□□□□ 0.68
SHC3Q92529 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SHC3Q92529 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.3■□□□□ 0.68
SHC3Q92529 AC112907.2-201ENST00000448639 330 ntBASIC19.3■□□□□ 0.68
SHC3Q92529 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SHC3Q92529 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.3■□□□□ 0.68
SHC3Q92529 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHC3Q92529 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms