Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF138Q8WVD3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF138Q8WVD3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF138Q8WVD3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF138Q8WVD3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF138Q8WVD3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF138Q8WVD3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF138Q8WVD3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF138Q8WVD3 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF138Q8WVD3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF138Q8WVD3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF138Q8WVD3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF138Q8WVD3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF138Q8WVD3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RNF138Q8WVD3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
RNF138Q8WVD3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF138Q8WVD3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF138Q8WVD3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF138Q8WVD3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF138Q8WVD3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF138Q8WVD3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF138Q8WVD3 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF138Q8WVD3 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
RNF138Q8WVD3 HCG4P8-203ENST00000443049 980 ntBASIC16.34■□□□□ 0.21
RNF138Q8WVD3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.34■□□□□ 0.21
RNF138Q8WVD3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.34■□□□□ 0.21
RNF138Q8WVD3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF138Q8WVD3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF138Q8WVD3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.34■□□□□ 0.21
RNF138Q8WVD3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF138Q8WVD3 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.34■□□□□ 0.21
RNF138Q8WVD3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.34■□□□□ 0.21
RNF138Q8WVD3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.34■□□□□ 0.21
RNF138Q8WVD3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF138Q8WVD3 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF138Q8WVD3 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF138Q8WVD3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF138Q8WVD3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF138Q8WVD3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF138Q8WVD3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF138Q8WVD3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF138Q8WVD3 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF138Q8WVD3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF138Q8WVD3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF138Q8WVD3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RNF138Q8WVD3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF138Q8WVD3 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.33■□□□□ 0.21
RNF138Q8WVD3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.33■□□□□ 0.21
RNF138Q8WVD3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF138Q8WVD3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF138Q8WVD3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF138Q8WVD3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.33■□□□□ 0.21
RNF138Q8WVD3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF138Q8WVD3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.33■□□□□ 0.21
RNF138Q8WVD3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
RNF138Q8WVD3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF138Q8WVD3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RNF138Q8WVD3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF138Q8WVD3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF138Q8WVD3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF138Q8WVD3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF138Q8WVD3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF138Q8WVD3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF138Q8WVD3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
RNF138Q8WVD3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF138Q8WVD3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF138Q8WVD3 DDX43P3-201ENST00000441064 443 ntBASIC16.33■□□□□ 0.2
RNF138Q8WVD3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF138Q8WVD3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.33■□□□□ 0.2
RNF138Q8WVD3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF138Q8WVD3 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF138Q8WVD3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.33■□□□□ 0.2
RNF138Q8WVD3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.33■□□□□ 0.2
RNF138Q8WVD3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF138Q8WVD3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.33■□□□□ 0.2
RNF138Q8WVD3 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF138Q8WVD3 BNIP3P18-201ENST00000593976 575 ntBASIC16.33■□□□□ 0.2
RNF138Q8WVD3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF138Q8WVD3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF138Q8WVD3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RNF138Q8WVD3 NSUN5P1-202ENST00000421140 1535 ntBASIC16.33■□□□□ 0.2
RNF138Q8WVD3 NSUN5P2-203ENST00000457352 1529 ntBASIC16.33■□□□□ 0.2
RNF138Q8WVD3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RNF138Q8WVD3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF138Q8WVD3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF138Q8WVD3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF138Q8WVD3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.33■□□□□ 0.2
RNF138Q8WVD3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF138Q8WVD3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF138Q8WVD3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF138Q8WVD3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF138Q8WVD3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.33■□□□□ 0.2
RNF138Q8WVD3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF138Q8WVD3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF138Q8WVD3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF138Q8WVD3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.32■□□□□ 0.2
RNF138Q8WVD3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF138Q8WVD3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF138Q8WVD3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF138Q8WVD3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms