Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
U2AF1L4Q8WU68 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
U2AF1L4Q8WU68 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
U2AF1L4Q8WU68 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
U2AF1L4Q8WU68 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.69■□□□□ 0.9
U2AF1L4Q8WU68 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
U2AF1L4Q8WU68 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
U2AF1L4Q8WU68 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
U2AF1L4Q8WU68 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
U2AF1L4Q8WU68 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
U2AF1L4Q8WU68 DNAJB3-201ENST00000446806 729 ntBASIC20.69■□□□□ 0.9
U2AF1L4Q8WU68 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.69■□□□□ 0.9
U2AF1L4Q8WU68 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.69■□□□□ 0.9
U2AF1L4Q8WU68 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.69■□□□□ 0.9
U2AF1L4Q8WU68 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.69■□□□□ 0.9
U2AF1L4Q8WU68 RPS15-207ENST00000591032 550 ntTSL 3 BASIC20.69■□□□□ 0.9
U2AF1L4Q8WU68 AC134684.3-201ENST00000641758 218 ntBASIC20.69■□□□□ 0.9
U2AF1L4Q8WU68 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
U2AF1L4Q8WU68 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
U2AF1L4Q8WU68 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
U2AF1L4Q8WU68 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
U2AF1L4Q8WU68 AC141586.3-201ENST00000562166 1838 ntBASIC20.69■□□□□ 0.9
U2AF1L4Q8WU68 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.69■□□□□ 0.9
U2AF1L4Q8WU68 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
U2AF1L4Q8WU68 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2AF1L4Q8WU68 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2AF1L4Q8WU68 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2AF1L4Q8WU68 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
U2AF1L4Q8WU68 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
U2AF1L4Q8WU68 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.68■□□□□ 0.9
U2AF1L4Q8WU68 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
U2AF1L4Q8WU68 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.68■□□□□ 0.9
U2AF1L4Q8WU68 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2AF1L4Q8WU68 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.68■□□□□ 0.9
U2AF1L4Q8WU68 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2AF1L4Q8WU68 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
U2AF1L4Q8WU68 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2AF1L4Q8WU68 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2AF1L4Q8WU68 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2AF1L4Q8WU68 RCN1P2-201ENST00000398357 915 ntBASIC20.68■□□□□ 0.9
U2AF1L4Q8WU68 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2AF1L4Q8WU68 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.68■□□□□ 0.9
U2AF1L4Q8WU68 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.68■□□□□ 0.9
U2AF1L4Q8WU68 KRT18P3-201ENST00000451602 1288 ntBASIC20.68■□□□□ 0.9
U2AF1L4Q8WU68 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.68■□□□□ 0.9
U2AF1L4Q8WU68 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.68■□□□□ 0.9
U2AF1L4Q8WU68 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
U2AF1L4Q8WU68 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
U2AF1L4Q8WU68 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
U2AF1L4Q8WU68 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2AF1L4Q8WU68 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2AF1L4Q8WU68 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.68■□□□□ 0.9
U2AF1L4Q8WU68 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2AF1L4Q8WU68 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
U2AF1L4Q8WU68 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2AF1L4Q8WU68 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2AF1L4Q8WU68 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.68■□□□□ 0.9
U2AF1L4Q8WU68 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
U2AF1L4Q8WU68 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.67■□□□□ 0.9
U2AF1L4Q8WU68 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
U2AF1L4Q8WU68 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
U2AF1L4Q8WU68 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
U2AF1L4Q8WU68 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
U2AF1L4Q8WU68 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
U2AF1L4Q8WU68 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
U2AF1L4Q8WU68 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.67■□□□□ 0.9
U2AF1L4Q8WU68 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
U2AF1L4Q8WU68 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.67■□□□□ 0.9
U2AF1L4Q8WU68 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
U2AF1L4Q8WU68 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.67■□□□□ 0.9
U2AF1L4Q8WU68 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.67■□□□□ 0.9
U2AF1L4Q8WU68 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.67■□□□□ 0.9
U2AF1L4Q8WU68 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC20.67■□□□□ 0.9
U2AF1L4Q8WU68 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.67■□□□□ 0.9
U2AF1L4Q8WU68 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.67■□□□□ 0.9
U2AF1L4Q8WU68 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC20.67■□□□□ 0.9
U2AF1L4Q8WU68 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
U2AF1L4Q8WU68 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
U2AF1L4Q8WU68 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.66■□□□□ 0.9
U2AF1L4Q8WU68 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
U2AF1L4Q8WU68 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
U2AF1L4Q8WU68 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
U2AF1L4Q8WU68 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
U2AF1L4Q8WU68 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.66■□□□□ 0.9
U2AF1L4Q8WU68 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.66■□□□□ 0.9
U2AF1L4Q8WU68 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.66■□□□□ 0.9
U2AF1L4Q8WU68 AC040169.1-201ENST00000565382 521 ntBASIC20.66■□□□□ 0.9
U2AF1L4Q8WU68 MIR3197-201ENST00000582241 73 ntBASIC20.66■□□□□ 0.9
U2AF1L4Q8WU68 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
U2AF1L4Q8WU68 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
U2AF1L4Q8WU68 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
U2AF1L4Q8WU68 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.66■□□□□ 0.9
U2AF1L4Q8WU68 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
U2AF1L4Q8WU68 AC034236.2-201ENST00000606662 1610 ntBASIC20.66■□□□□ 0.9
U2AF1L4Q8WU68 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
U2AF1L4Q8WU68 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
U2AF1L4Q8WU68 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
U2AF1L4Q8WU68 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
U2AF1L4Q8WU68 AC006333.2-201ENST00000607957 2099 ntBASIC20.66■□□□□ 0.9
U2AF1L4Q8WU68 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms