Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SNED1Q8TER0 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SNED1Q8TER0 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SNED1Q8TER0 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SNED1Q8TER0 AC211486.1-202ENST00000416371 468 ntBASIC21.94■■□□□ 1.1
SNED1Q8TER0 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC21.94■■□□□ 1.1
SNED1Q8TER0 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC21.94■■□□□ 1.1
SNED1Q8TER0 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC21.94■■□□□ 1.1
SNED1Q8TER0 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC21.94■■□□□ 1.1
SNED1Q8TER0 CYMP-203ENST00000474680 1263 ntBASIC21.94■■□□□ 1.1
SNED1Q8TER0 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SNED1Q8TER0 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SNED1Q8TER0 AC211476.1-201ENST00000503899 468 ntBASIC21.94■■□□□ 1.1
SNED1Q8TER0 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC21.94■■□□□ 1.1
SNED1Q8TER0 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SNED1Q8TER0 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SNED1Q8TER0 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.94■■□□□ 1.1
SNED1Q8TER0 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
SNED1Q8TER0 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SNED1Q8TER0 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SNED1Q8TER0 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC21.93■■□□□ 1.1
SNED1Q8TER0 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SNED1Q8TER0 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SNED1Q8TER0 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SNED1Q8TER0 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SNED1Q8TER0 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SNED1Q8TER0 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC21.93■■□□□ 1.1
SNED1Q8TER0 METTL21AP1-201ENST00000438852 635 ntBASIC21.93■■□□□ 1.1
SNED1Q8TER0 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC21.93■■□□□ 1.1
SNED1Q8TER0 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
SNED1Q8TER0 RPS15-207ENST00000591032 550 ntTSL 3 BASIC21.93■■□□□ 1.1
SNED1Q8TER0 AC006557.2-201ENST00000592985 1240 ntBASIC21.93■■□□□ 1.1
SNED1Q8TER0 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC21.93■■□□□ 1.1
SNED1Q8TER0 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
SNED1Q8TER0 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC21.93■■□□□ 1.1
SNED1Q8TER0 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.93■■□□□ 1.1
SNED1Q8TER0 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.93■■□□□ 1.1
SNED1Q8TER0 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC21.93■■□□□ 1.1
SNED1Q8TER0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SNED1Q8TER0 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SNED1Q8TER0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SNED1Q8TER0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SNED1Q8TER0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SNED1Q8TER0 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SNED1Q8TER0 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC21.92■■□□□ 1.1
SNED1Q8TER0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SNED1Q8TER0 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC21.92■■□□□ 1.1
SNED1Q8TER0 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC21.92■■□□□ 1.1
SNED1Q8TER0 SPDYE21P-201ENST00000413323 827 ntBASIC21.92■■□□□ 1.1
SNED1Q8TER0 AC096633.1-201ENST00000422446 749 ntBASIC21.92■■□□□ 1.1
SNED1Q8TER0 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SNED1Q8TER0 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC21.92■■□□□ 1.1
SNED1Q8TER0 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC21.92■■□□□ 1.1
SNED1Q8TER0 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.92■■□□□ 1.1
SNED1Q8TER0 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
SNED1Q8TER0 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC21.92■■□□□ 1.1
SNED1Q8TER0 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SNED1Q8TER0 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SNED1Q8TER0 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SNED1Q8TER0 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SNED1Q8TER0 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
SNED1Q8TER0 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SNED1Q8TER0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SNED1Q8TER0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SNED1Q8TER0 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
SNED1Q8TER0 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SNED1Q8TER0 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SNED1Q8TER0 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SNED1Q8TER0 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
SNED1Q8TER0 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
SNED1Q8TER0 ELK2BP-201ENST00000415014 1224 ntBASIC21.91■■□□□ 1.1
SNED1Q8TER0 PRYP5-201ENST00000451909 266 ntBASIC21.91■■□□□ 1.1
SNED1Q8TER0 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC21.91■■□□□ 1.1
SNED1Q8TER0 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC21.91■■□□□ 1.1
SNED1Q8TER0 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SNED1Q8TER0 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SNED1Q8TER0 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC21.91■■□□□ 1.1
SNED1Q8TER0 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC21.91■■□□□ 1.1
SNED1Q8TER0 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SNED1Q8TER0 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SNED1Q8TER0 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SNED1Q8TER0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SNED1Q8TER0 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC21.91■■□□□ 1.1
SNED1Q8TER0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SNED1Q8TER0 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SNED1Q8TER0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SNED1Q8TER0 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SNED1Q8TER0 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SNED1Q8TER0 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SNED1Q8TER0 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SNED1Q8TER0 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC21.9■■□□□ 1.1
SNED1Q8TER0 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SNED1Q8TER0 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC21.9■■□□□ 1.1
SNED1Q8TER0 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC21.9■■□□□ 1.1
SNED1Q8TER0 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC21.9■■□□□ 1.1
SNED1Q8TER0 AC136632.2-201ENST00000512891 861 ntBASIC21.9■■□□□ 1.1
SNED1Q8TER0 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC21.9■■□□□ 1.1
SNED1Q8TER0 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SNED1Q8TER0 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC21.9■■□□□ 1.1
SNED1Q8TER0 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms