Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01006Q8NI28 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01006Q8NI28 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
LINC01006Q8NI28 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01006Q8NI28 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
LINC01006Q8NI28 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01006Q8NI28 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC14.06□□□□□ -0.16
LINC01006Q8NI28 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC01006Q8NI28 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC01006Q8NI28 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01006Q8NI28 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01006Q8NI28 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
LINC01006Q8NI28 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01006Q8NI28 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01006Q8NI28 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01006Q8NI28 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC01006Q8NI28 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC14.05□□□□□ -0.16
LINC01006Q8NI28 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC01006Q8NI28 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01006Q8NI28 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC01006Q8NI28 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01006Q8NI28 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC01006Q8NI28 FAM220CP-201ENST00000395253 831 ntBASIC14.05□□□□□ -0.16
LINC01006Q8NI28 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01006Q8NI28 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01006Q8NI28 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
LINC01006Q8NI28 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
LINC01006Q8NI28 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.05□□□□□ -0.16
LINC01006Q8NI28 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.05□□□□□ -0.16
LINC01006Q8NI28 AC012640.2-201ENST00000561606 901 ntBASIC14.05□□□□□ -0.16
LINC01006Q8NI28 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC01006Q8NI28 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.05□□□□□ -0.16
LINC01006Q8NI28 NKAPP1-205ENST00000585790 367 ntBASIC14.05□□□□□ -0.16
LINC01006Q8NI28 MTDHP4-201ENST00000600287 670 ntBASIC14.05□□□□□ -0.16
LINC01006Q8NI28 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01006Q8NI28 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01006Q8NI28 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01006Q8NI28 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01006Q8NI28 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01006Q8NI28 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01006Q8NI28 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC14.05□□□□□ -0.16
LINC01006Q8NI28 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01006Q8NI28 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.05□□□□□ -0.16
LINC01006Q8NI28 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01006Q8NI28 GMCL1P1-201ENST00000463439 1581 ntBASIC14.05□□□□□ -0.16
LINC01006Q8NI28 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.04□□□□□ -0.16
LINC01006Q8NI28 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC01006Q8NI28 AC120498.9-201ENST00000339021 3867 ntBASIC14.04□□□□□ -0.16
LINC01006Q8NI28 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
LINC01006Q8NI28 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01006Q8NI28 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC14.04□□□□□ -0.16
LINC01006Q8NI28 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LINC01006Q8NI28 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01006Q8NI28 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01006Q8NI28 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01006Q8NI28 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01006Q8NI28 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
LINC01006Q8NI28 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.04□□□□□ -0.16
LINC01006Q8NI28 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01006Q8NI28 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.04□□□□□ -0.16
LINC01006Q8NI28 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.04□□□□□ -0.16
LINC01006Q8NI28 PGAM5P1-201ENST00000518923 814 ntBASIC14.04□□□□□ -0.16
LINC01006Q8NI28 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01006Q8NI28 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.04□□□□□ -0.16
LINC01006Q8NI28 FAM197Y3-203ENST00000618346 717 ntBASIC14.04□□□□□ -0.16
LINC01006Q8NI28 AC008735.5-201ENST00000623544 497 ntBASIC14.04□□□□□ -0.16
LINC01006Q8NI28 AP000867.4-201ENST00000641616 219 ntBASIC14.04□□□□□ -0.16
LINC01006Q8NI28 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC01006Q8NI28 AC097374.2-201ENST00000618617 1306 ntBASIC14.04□□□□□ -0.16
LINC01006Q8NI28 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC14.04□□□□□ -0.16
LINC01006Q8NI28 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01006Q8NI28 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
LINC01006Q8NI28 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01006Q8NI28 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC01006Q8NI28 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01006Q8NI28 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01006Q8NI28 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01006Q8NI28 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01006Q8NI28 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01006Q8NI28 ANO7L1-203ENST00000602586 1720 ntBASIC14.04□□□□□ -0.16
LINC01006Q8NI28 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01006Q8NI28 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LINC01006Q8NI28 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC14.03□□□□□ -0.16
LINC01006Q8NI28 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01006Q8NI28 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01006Q8NI28 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01006Q8NI28 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
LINC01006Q8NI28 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01006Q8NI28 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
LINC01006Q8NI28 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01006Q8NI28 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01006Q8NI28 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01006Q8NI28 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LINC01006Q8NI28 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.03□□□□□ -0.16
LINC01006Q8NI28 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.03□□□□□ -0.16
LINC01006Q8NI28 MED15P5-201ENST00000423150 992 ntBASIC14.03□□□□□ -0.16
LINC01006Q8NI28 AL591424.1-201ENST00000442569 1213 ntBASIC14.03□□□□□ -0.16
LINC01006Q8NI28 RNA5SP415-201ENST00000517246 115 ntBASIC14.03□□□□□ -0.16
LINC01006Q8NI28 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.03□□□□□ -0.16
LINC01006Q8NI28 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms