Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.42■□□□□ 0.06
CLDND2Q8NHS1 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CLDND2Q8NHS1 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDND2Q8NHS1 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CLDND2Q8NHS1 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDND2Q8NHS1 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.42■□□□□ 0.06
CLDND2Q8NHS1 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDND2Q8NHS1 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLDND2Q8NHS1 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDND2Q8NHS1 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLDND2Q8NHS1 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.42■□□□□ 0.06
CLDND2Q8NHS1 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDND2Q8NHS1 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CLDND2Q8NHS1 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDND2Q8NHS1 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.42■□□□□ 0.06
CLDND2Q8NHS1 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDND2Q8NHS1 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDND2Q8NHS1 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDND2Q8NHS1 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 CHCHD2P8-201ENST00000429873 447 ntBASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 PVRIG2P-201ENST00000435460 978 ntBASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 AP002383.4-201ENST00000442518 975 ntBASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 RNF126P1-202ENST00000569893 925 ntBASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 MIR3180-1-201ENST00000580374 94 ntBASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 MIR3180-3-201ENST00000584616 94 ntBASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 AP002414.4-201ENST00000589764 1148 ntBASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDND2Q8NHS1 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 PRELID1P1-202ENST00000567272 903 ntBASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 MIR3180-4-201ENST00000582223 153 ntBASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms