Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CNEP1R1Q8N9A8 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.08■□□□□ 0.17
CNEP1R1Q8N9A8 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.08■□□□□ 0.17
CNEP1R1Q8N9A8 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CNEP1R1Q8N9A8 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CNEP1R1Q8N9A8 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.08■□□□□ 0.17
CNEP1R1Q8N9A8 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CNEP1R1Q8N9A8 AL031598.1-201ENST00000561511 1773 ntBASIC16.08■□□□□ 0.17
CNEP1R1Q8N9A8 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CNEP1R1Q8N9A8 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.08■□□□□ 0.16
CNEP1R1Q8N9A8 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
CNEP1R1Q8N9A8 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CNEP1R1Q8N9A8 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CNEP1R1Q8N9A8 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CNEP1R1Q8N9A8 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.08■□□□□ 0.16
CNEP1R1Q8N9A8 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.08■□□□□ 0.16
CNEP1R1Q8N9A8 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.08■□□□□ 0.16
CNEP1R1Q8N9A8 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CNEP1R1Q8N9A8 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.08■□□□□ 0.16
CNEP1R1Q8N9A8 AL732292.2-201ENST00000609649 430 ntBASIC16.08■□□□□ 0.16
CNEP1R1Q8N9A8 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CNEP1R1Q8N9A8 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CNEP1R1Q8N9A8 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
CNEP1R1Q8N9A8 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CNEP1R1Q8N9A8 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CNEP1R1Q8N9A8 GMCL1P1-201ENST00000463439 1581 ntBASIC16.08■□□□□ 0.16
CNEP1R1Q8N9A8 LINC01126-201ENST00000623515 1646 ntBASIC16.08■□□□□ 0.16
CNEP1R1Q8N9A8 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.08■□□□□ 0.16
CNEP1R1Q8N9A8 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.08■□□□□ 0.16
CNEP1R1Q8N9A8 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.08■□□□□ 0.16
CNEP1R1Q8N9A8 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CNEP1R1Q8N9A8 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CNEP1R1Q8N9A8 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNEP1R1Q8N9A8 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CNEP1R1Q8N9A8 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.07■□□□□ 0.16
CNEP1R1Q8N9A8 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNEP1R1Q8N9A8 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CNEP1R1Q8N9A8 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNEP1R1Q8N9A8 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CNEP1R1Q8N9A8 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
CNEP1R1Q8N9A8 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNEP1R1Q8N9A8 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNEP1R1Q8N9A8 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.07■□□□□ 0.16
CNEP1R1Q8N9A8 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.07■□□□□ 0.16
CNEP1R1Q8N9A8 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNEP1R1Q8N9A8 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
CNEP1R1Q8N9A8 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.07■□□□□ 0.16
CNEP1R1Q8N9A8 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.07■□□□□ 0.16
CNEP1R1Q8N9A8 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CNEP1R1Q8N9A8 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.07■□□□□ 0.16
CNEP1R1Q8N9A8 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.07■□□□□ 0.16
CNEP1R1Q8N9A8 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CNEP1R1Q8N9A8 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNEP1R1Q8N9A8 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.07■□□□□ 0.16
CNEP1R1Q8N9A8 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CNEP1R1Q8N9A8 RN7SL510P-201ENST00000581311 263 ntBASIC16.07■□□□□ 0.16
CNEP1R1Q8N9A8 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CNEP1R1Q8N9A8 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CNEP1R1Q8N9A8 IFNL4P1-201ENST00000607083 540 ntBASIC16.07■□□□□ 0.16
CNEP1R1Q8N9A8 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.07■□□□□ 0.16
CNEP1R1Q8N9A8 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.07■□□□□ 0.16
CNEP1R1Q8N9A8 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CNEP1R1Q8N9A8 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CNEP1R1Q8N9A8 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CNEP1R1Q8N9A8 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNEP1R1Q8N9A8 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CNEP1R1Q8N9A8 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CNEP1R1Q8N9A8 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNEP1R1Q8N9A8 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNEP1R1Q8N9A8 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CNEP1R1Q8N9A8 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNEP1R1Q8N9A8 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNEP1R1Q8N9A8 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
CNEP1R1Q8N9A8 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNEP1R1Q8N9A8 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.06■□□□□ 0.16
CNEP1R1Q8N9A8 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.06■□□□□ 0.16
CNEP1R1Q8N9A8 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
CNEP1R1Q8N9A8 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNEP1R1Q8N9A8 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNEP1R1Q8N9A8 NSUN5P1-202ENST00000421140 1535 ntBASIC16.06■□□□□ 0.16
CNEP1R1Q8N9A8 NSUN5P2-203ENST00000457352 1529 ntBASIC16.06■□□□□ 0.16
CNEP1R1Q8N9A8 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CNEP1R1Q8N9A8 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CNEP1R1Q8N9A8 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.06■□□□□ 0.16
CNEP1R1Q8N9A8 AC004870.1-201ENST00000315132 882 ntBASIC16.06■□□□□ 0.16
CNEP1R1Q8N9A8 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CNEP1R1Q8N9A8 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNEP1R1Q8N9A8 AL845331.1-201ENST00000424978 1190 ntBASIC16.06■□□□□ 0.16
CNEP1R1Q8N9A8 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.06■□□□□ 0.16
CNEP1R1Q8N9A8 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.06■□□□□ 0.16
CNEP1R1Q8N9A8 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.06■□□□□ 0.16
CNEP1R1Q8N9A8 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CNEP1R1Q8N9A8 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNEP1R1Q8N9A8 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CNEP1R1Q8N9A8 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNEP1R1Q8N9A8 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNEP1R1Q8N9A8 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNEP1R1Q8N9A8 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNEP1R1Q8N9A8 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNEP1R1Q8N9A8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms