Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C3orf56Q8N813 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
C3orf56Q8N813 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
C3orf56Q8N813 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C3orf56Q8N813 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
C3orf56Q8N813 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
C3orf56Q8N813 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
C3orf56Q8N813 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
C3orf56Q8N813 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
C3orf56Q8N813 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC14.15□□□□□ -0.14
C3orf56Q8N813 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
C3orf56Q8N813 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
C3orf56Q8N813 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.15□□□□□ -0.14
C3orf56Q8N813 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C3orf56Q8N813 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C3orf56Q8N813 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C3orf56Q8N813 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C3orf56Q8N813 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
C3orf56Q8N813 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
C3orf56Q8N813 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.15□□□□□ -0.14
C3orf56Q8N813 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.15□□□□□ -0.14
C3orf56Q8N813 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
C3orf56Q8N813 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.15□□□□□ -0.14
C3orf56Q8N813 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
C3orf56Q8N813 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C3orf56Q8N813 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.15□□□□□ -0.14
C3orf56Q8N813 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.15□□□□□ -0.14
C3orf56Q8N813 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
C3orf56Q8N813 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.15□□□□□ -0.14
C3orf56Q8N813 MIR1199-201ENST00000621445 119 ntBASIC14.15□□□□□ -0.14
C3orf56Q8N813 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
C3orf56Q8N813 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
C3orf56Q8N813 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C3orf56Q8N813 AC073314.1-201ENST00000568729 2216 ntBASIC14.15□□□□□ -0.14
C3orf56Q8N813 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C3orf56Q8N813 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C3orf56Q8N813 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C3orf56Q8N813 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
C3orf56Q8N813 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC14.15□□□□□ -0.14
C3orf56Q8N813 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C3orf56Q8N813 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
C3orf56Q8N813 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
C3orf56Q8N813 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C3orf56Q8N813 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
C3orf56Q8N813 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C3orf56Q8N813 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C3orf56Q8N813 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
C3orf56Q8N813 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
C3orf56Q8N813 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC14.14□□□□□ -0.15
C3orf56Q8N813 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
C3orf56Q8N813 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C3orf56Q8N813 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C3orf56Q8N813 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C3orf56Q8N813 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
C3orf56Q8N813 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.14□□□□□ -0.15
C3orf56Q8N813 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.14□□□□□ -0.15
C3orf56Q8N813 AL645939.2-201ENST00000427340 991 ntBASIC14.14□□□□□ -0.15
C3orf56Q8N813 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.14□□□□□ -0.15
C3orf56Q8N813 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.14□□□□□ -0.15
C3orf56Q8N813 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.14□□□□□ -0.15
C3orf56Q8N813 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.14□□□□□ -0.15
C3orf56Q8N813 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.14□□□□□ -0.15
C3orf56Q8N813 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
C3orf56Q8N813 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.14□□□□□ -0.15
C3orf56Q8N813 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.14□□□□□ -0.15
C3orf56Q8N813 MTDHP4-201ENST00000600287 670 ntBASIC14.14□□□□□ -0.15
C3orf56Q8N813 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
C3orf56Q8N813 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
C3orf56Q8N813 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC14.14□□□□□ -0.15
C3orf56Q8N813 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
C3orf56Q8N813 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
C3orf56Q8N813 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
C3orf56Q8N813 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.14□□□□□ -0.15
C3orf56Q8N813 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C3orf56Q8N813 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
C3orf56Q8N813 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
C3orf56Q8N813 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C3orf56Q8N813 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C3orf56Q8N813 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C3orf56Q8N813 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
C3orf56Q8N813 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC14.13□□□□□ -0.15
C3orf56Q8N813 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
C3orf56Q8N813 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
C3orf56Q8N813 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
C3orf56Q8N813 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC14.13□□□□□ -0.15
C3orf56Q8N813 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
C3orf56Q8N813 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C3orf56Q8N813 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C3orf56Q8N813 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C3orf56Q8N813 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C3orf56Q8N813 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C3orf56Q8N813 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
C3orf56Q8N813 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
C3orf56Q8N813 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
C3orf56Q8N813 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.13□□□□□ -0.15
C3orf56Q8N813 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.13□□□□□ -0.15
C3orf56Q8N813 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC14.13□□□□□ -0.15
C3orf56Q8N813 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
C3orf56Q8N813 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.13□□□□□ -0.15
C3orf56Q8N813 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms