Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SIX5Q8N196 FP475955.4-201ENST00000623131 1990 ntBASIC18.51■□□□□ 0.55
SIX5Q8N196 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SIX5Q8N196 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SIX5Q8N196 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SIX5Q8N196 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SIX5Q8N196 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.51■□□□□ 0.55
SIX5Q8N196 AC106820.2-201ENST00000563775 3264 ntBASIC18.51■□□□□ 0.55
SIX5Q8N196 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SIX5Q8N196 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SIX5Q8N196 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SIX5Q8N196 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SIX5Q8N196 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
SIX5Q8N196 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SIX5Q8N196 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.51■□□□□ 0.55
SIX5Q8N196 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.51■□□□□ 0.55
SIX5Q8N196 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.51■□□□□ 0.55
SIX5Q8N196 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.51■□□□□ 0.55
SIX5Q8N196 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SIX5Q8N196 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SIX5Q8N196 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.51■□□□□ 0.55
SIX5Q8N196 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.51■□□□□ 0.55
SIX5Q8N196 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.51■□□□□ 0.55
SIX5Q8N196 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.51■□□□□ 0.55
SIX5Q8N196 MIR3197-201ENST00000582241 73 ntBASIC18.51■□□□□ 0.55
SIX5Q8N196 MTDHP5-201ENST00000598980 586 ntBASIC18.51■□□□□ 0.55
SIX5Q8N196 AL596442.2-201ENST00000610240 980 ntBASIC18.51■□□□□ 0.55
SIX5Q8N196 AL139288.1-201ENST00000623748 933 ntBASIC18.51■□□□□ 0.55
SIX5Q8N196 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SIX5Q8N196 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SIX5Q8N196 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SIX5Q8N196 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.51■□□□□ 0.55
SIX5Q8N196 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
SIX5Q8N196 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SIX5Q8N196 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SIX5Q8N196 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SIX5Q8N196 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SIX5Q8N196 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.5■□□□□ 0.55
SIX5Q8N196 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.5■□□□□ 0.55
SIX5Q8N196 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SIX5Q8N196 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.5■□□□□ 0.55
SIX5Q8N196 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SIX5Q8N196 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.5■□□□□ 0.55
SIX5Q8N196 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SIX5Q8N196 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
SIX5Q8N196 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.5■□□□□ 0.55
SIX5Q8N196 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SIX5Q8N196 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SIX5Q8N196 METTL21AP1-201ENST00000438852 635 ntBASIC18.5■□□□□ 0.55
SIX5Q8N196 MTCL1P1-201ENST00000446207 792 ntBASIC18.5■□□□□ 0.55
SIX5Q8N196 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.5■□□□□ 0.55
SIX5Q8N196 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.5■□□□□ 0.55
SIX5Q8N196 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.5■□□□□ 0.55
SIX5Q8N196 MTDHP4-201ENST00000600287 670 ntBASIC18.5■□□□□ 0.55
SIX5Q8N196 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SIX5Q8N196 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.5■□□□□ 0.55
SIX5Q8N196 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SIX5Q8N196 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SIX5Q8N196 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SIX5Q8N196 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.5■□□□□ 0.55
SIX5Q8N196 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SIX5Q8N196 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SIX5Q8N196 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SIX5Q8N196 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
SIX5Q8N196 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SIX5Q8N196 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIX5Q8N196 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.49■□□□□ 0.55
SIX5Q8N196 AC125634.1-201ENST00000438758 1403 ntBASIC18.49■□□□□ 0.55
SIX5Q8N196 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SIX5Q8N196 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIX5Q8N196 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIX5Q8N196 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SIX5Q8N196 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIX5Q8N196 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIX5Q8N196 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIX5Q8N196 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.49■□□□□ 0.55
SIX5Q8N196 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.49■□□□□ 0.55
SIX5Q8N196 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.49■□□□□ 0.55
SIX5Q8N196 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.49■□□□□ 0.55
SIX5Q8N196 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.49■□□□□ 0.55
SIX5Q8N196 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.49■□□□□ 0.55
SIX5Q8N196 AC107918.4-202ENST00000641623 219 ntBASIC18.49■□□□□ 0.55
SIX5Q8N196 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIX5Q8N196 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SIX5Q8N196 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIX5Q8N196 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.49■□□□□ 0.55
SIX5Q8N196 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIX5Q8N196 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIX5Q8N196 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.49■□□□□ 0.55
SIX5Q8N196 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SIX5Q8N196 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIX5Q8N196 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIX5Q8N196 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIX5Q8N196 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIX5Q8N196 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIX5Q8N196 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SIX5Q8N196 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SIX5Q8N196 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SIX5Q8N196 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SIX5Q8N196 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms