Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEFF1Q8IYR6 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEFF1Q8IYR6 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEFF1Q8IYR6 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEFF1Q8IYR6 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TMEFF1Q8IYR6 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.96■□□□□ 0.47
TMEFF1Q8IYR6 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.46
TMEFF1Q8IYR6 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
TMEFF1Q8IYR6 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.95■□□□□ 0.46
TMEFF1Q8IYR6 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEFF1Q8IYR6 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TMEFF1Q8IYR6 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEFF1Q8IYR6 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TMEFF1Q8IYR6 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEFF1Q8IYR6 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TMEFF1Q8IYR6 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.95■□□□□ 0.46
TMEFF1Q8IYR6 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEFF1Q8IYR6 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEFF1Q8IYR6 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEFF1Q8IYR6 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TMEFF1Q8IYR6 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.95■□□□□ 0.46
TMEFF1Q8IYR6 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.95■□□□□ 0.46
TMEFF1Q8IYR6 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.95■□□□□ 0.46
TMEFF1Q8IYR6 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEFF1Q8IYR6 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEFF1Q8IYR6 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEFF1Q8IYR6 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.95■□□□□ 0.46
TMEFF1Q8IYR6 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEFF1Q8IYR6 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEFF1Q8IYR6 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.95■□□□□ 0.46
TMEFF1Q8IYR6 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.95■□□□□ 0.46
TMEFF1Q8IYR6 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.95■□□□□ 0.46
TMEFF1Q8IYR6 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.95■□□□□ 0.46
TMEFF1Q8IYR6 AC034105.1-201ENST00000563488 319 ntBASIC17.95■□□□□ 0.46
TMEFF1Q8IYR6 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TMEFF1Q8IYR6 FAM197Y3-203ENST00000618346 717 ntBASIC17.95■□□□□ 0.46
TMEFF1Q8IYR6 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.95■□□□□ 0.46
TMEFF1Q8IYR6 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.95■□□□□ 0.46
TMEFF1Q8IYR6 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEFF1Q8IYR6 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.95■□□□□ 0.46
TMEFF1Q8IYR6 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TMEFF1Q8IYR6 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEFF1Q8IYR6 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TMEFF1Q8IYR6 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TMEFF1Q8IYR6 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMEFF1Q8IYR6 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.94■□□□□ 0.46
TMEFF1Q8IYR6 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMEFF1Q8IYR6 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TMEFF1Q8IYR6 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.94■□□□□ 0.46
TMEFF1Q8IYR6 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMEFF1Q8IYR6 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMEFF1Q8IYR6 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMEFF1Q8IYR6 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMEFF1Q8IYR6 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TMEFF1Q8IYR6 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TMEFF1Q8IYR6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.94■□□□□ 0.46
TMEFF1Q8IYR6 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.94■□□□□ 0.46
TMEFF1Q8IYR6 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.94■□□□□ 0.46
TMEFF1Q8IYR6 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
TMEFF1Q8IYR6 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.94■□□□□ 0.46
TMEFF1Q8IYR6 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.94■□□□□ 0.46
TMEFF1Q8IYR6 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TMEFF1Q8IYR6 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.94■□□□□ 0.46
TMEFF1Q8IYR6 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
TMEFF1Q8IYR6 AC010327.4-202ENST00000591484 748 ntBASIC17.94■□□□□ 0.46
TMEFF1Q8IYR6 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.94■□□□□ 0.46
TMEFF1Q8IYR6 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TMEFF1Q8IYR6 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMEFF1Q8IYR6 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TMEFF1Q8IYR6 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TMEFF1Q8IYR6 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMEFF1Q8IYR6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TMEFF1Q8IYR6 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEFF1Q8IYR6 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TMEFF1Q8IYR6 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEFF1Q8IYR6 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TMEFF1Q8IYR6 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEFF1Q8IYR6 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.93■□□□□ 0.46
TMEFF1Q8IYR6 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TMEFF1Q8IYR6 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEFF1Q8IYR6 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.93■□□□□ 0.46
TMEFF1Q8IYR6 RNA5SP415-201ENST00000517246 115 ntBASIC17.93■□□□□ 0.46
TMEFF1Q8IYR6 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.93■□□□□ 0.46
TMEFF1Q8IYR6 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.93■□□□□ 0.46
TMEFF1Q8IYR6 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.93■□□□□ 0.46
TMEFF1Q8IYR6 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEFF1Q8IYR6 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.93■□□□□ 0.46
TMEFF1Q8IYR6 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TMEFF1Q8IYR6 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.93■□□□□ 0.46
TMEFF1Q8IYR6 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.93■□□□□ 0.46
TMEFF1Q8IYR6 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEFF1Q8IYR6 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEFF1Q8IYR6 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.93■□□□□ 0.46
TMEFF1Q8IYR6 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEFF1Q8IYR6 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.93■□□□□ 0.46
TMEFF1Q8IYR6 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEFF1Q8IYR6 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TMEFF1Q8IYR6 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TMEFF1Q8IYR6 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TMEFF1Q8IYR6 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms