Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.74■□□□□ 0.27
CHMP1BQ7LBR1 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.73■□□□□ 0.27
CHMP1BQ7LBR1 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.73■□□□□ 0.27
CHMP1BQ7LBR1 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CHMP1BQ7LBR1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CHMP1BQ7LBR1 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CHMP1BQ7LBR1 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.73■□□□□ 0.27
CHMP1BQ7LBR1 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP1BQ7LBR1 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP1BQ7LBR1 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP1BQ7LBR1 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP1BQ7LBR1 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP1BQ7LBR1 MIR564-202ENST00000385049 94 ntBASIC16.73■□□□□ 0.27
CHMP1BQ7LBR1 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP1BQ7LBR1 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.73■□□□□ 0.27
CHMP1BQ7LBR1 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP1BQ7LBR1 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.73■□□□□ 0.27
CHMP1BQ7LBR1 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.73■□□□□ 0.27
CHMP1BQ7LBR1 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CHMP1BQ7LBR1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.73■□□□□ 0.27
CHMP1BQ7LBR1 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
CHMP1BQ7LBR1 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CHMP1BQ7LBR1 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.73■□□□□ 0.27
CHMP1BQ7LBR1 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP1BQ7LBR1 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP1BQ7LBR1 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP1BQ7LBR1 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.73■□□□□ 0.27
CHMP1BQ7LBR1 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP1BQ7LBR1 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP1BQ7LBR1 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP1BQ7LBR1 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP1BQ7LBR1 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP1BQ7LBR1 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP1BQ7LBR1 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP1BQ7LBR1 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP1BQ7LBR1 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.73■□□□□ 0.27
CHMP1BQ7LBR1 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP1BQ7LBR1 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.73■□□□□ 0.27
CHMP1BQ7LBR1 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP1BQ7LBR1 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP1BQ7LBR1 AL390961.4-201ENST00000623958 2535 ntBASIC16.72■□□□□ 0.27
CHMP1BQ7LBR1 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP1BQ7LBR1 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP1BQ7LBR1 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.72■□□□□ 0.27
CHMP1BQ7LBR1 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP1BQ7LBR1 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP1BQ7LBR1 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CHMP1BQ7LBR1 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP1BQ7LBR1 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP1BQ7LBR1 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.72■□□□□ 0.27
CHMP1BQ7LBR1 STARP1-201ENST00000397973 869 ntBASIC16.72■□□□□ 0.27
CHMP1BQ7LBR1 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP1BQ7LBR1 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.72■□□□□ 0.27
CHMP1BQ7LBR1 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.72■□□□□ 0.27
CHMP1BQ7LBR1 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.72■□□□□ 0.27
CHMP1BQ7LBR1 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.72■□□□□ 0.27
CHMP1BQ7LBR1 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.72■□□□□ 0.27
CHMP1BQ7LBR1 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.72■□□□□ 0.27
CHMP1BQ7LBR1 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.72■□□□□ 0.27
CHMP1BQ7LBR1 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.72■□□□□ 0.27
CHMP1BQ7LBR1 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP1BQ7LBR1 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
CHMP1BQ7LBR1 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP1BQ7LBR1 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP1BQ7LBR1 AL161938.1-201ENST00000569833 2180 ntBASIC16.72■□□□□ 0.27
CHMP1BQ7LBR1 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP1BQ7LBR1 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP1BQ7LBR1 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP1BQ7LBR1 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP1BQ7LBR1 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CHMP1BQ7LBR1 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CHMP1BQ7LBR1 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP1BQ7LBR1 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP1BQ7LBR1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP1BQ7LBR1 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.71■□□□□ 0.27
CHMP1BQ7LBR1 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CHMP1BQ7LBR1 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.71■□□□□ 0.27
CHMP1BQ7LBR1 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP1BQ7LBR1 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.71■□□□□ 0.27
CHMP1BQ7LBR1 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP1BQ7LBR1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP1BQ7LBR1 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.71■□□□□ 0.27
CHMP1BQ7LBR1 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP1BQ7LBR1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP1BQ7LBR1 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP1BQ7LBR1 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
CHMP1BQ7LBR1 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP1BQ7LBR1 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP1BQ7LBR1 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CHMP1BQ7LBR1 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CHMP1BQ7LBR1 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
CHMP1BQ7LBR1 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.71■□□□□ 0.27
CHMP1BQ7LBR1 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.71■□□□□ 0.27
CHMP1BQ7LBR1 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP1BQ7LBR1 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.71■□□□□ 0.27
CHMP1BQ7LBR1 AL671277.2-201ENST00000458060 996 ntBASIC16.71■□□□□ 0.27
CHMP1BQ7LBR1 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.71■□□□□ 0.27
CHMP1BQ7LBR1 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.71■□□□□ 0.27
CHMP1BQ7LBR1 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
CHMP1BQ7LBR1 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms