Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF111Q6ZNA4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF111Q6ZNA4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RNF111Q6ZNA4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF111Q6ZNA4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF111Q6ZNA4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF111Q6ZNA4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF111Q6ZNA4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF111Q6ZNA4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF111Q6ZNA4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF111Q6ZNA4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF111Q6ZNA4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RNF111Q6ZNA4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 AL118508.1-201ENST00000613502 2345 ntBASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 AC128688.1-201ENST00000487626 519 ntBASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 EGLN1P1-201ENST00000531623 762 ntBASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 AC010947.1-201ENST00000623454 693 ntBASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 AC133561.5-201ENST00000635547 218 ntBASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 AC116562.4-202ENST00000641738 218 ntBASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RNF111Q6ZNA4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 TSPY14P-201ENST00000303979 915 ntBASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 LINC01568-207ENST00000641790 1380 ntBASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms