Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NIPAL3Q6P499 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NIPAL3Q6P499 AL137013.1-201ENST00000432946 1228 ntBASIC16.52■□□□□ 0.24
NIPAL3Q6P499 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.52■□□□□ 0.24
NIPAL3Q6P499 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.52■□□□□ 0.24
NIPAL3Q6P499 AC009947.2-201ENST00000444014 672 ntBASIC16.52■□□□□ 0.24
NIPAL3Q6P499 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.52■□□□□ 0.24
NIPAL3Q6P499 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.52■□□□□ 0.24
NIPAL3Q6P499 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.52■□□□□ 0.24
NIPAL3Q6P499 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NIPAL3Q6P499 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NIPAL3Q6P499 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NIPAL3Q6P499 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NIPAL3Q6P499 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NIPAL3Q6P499 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
NIPAL3Q6P499 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NIPAL3Q6P499 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
NIPAL3Q6P499 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NIPAL3Q6P499 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NIPAL3Q6P499 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NIPAL3Q6P499 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NIPAL3Q6P499 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NIPAL3Q6P499 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
NIPAL3Q6P499 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NIPAL3Q6P499 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NIPAL3Q6P499 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NIPAL3Q6P499 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.51■□□□□ 0.23
NIPAL3Q6P499 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NIPAL3Q6P499 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NIPAL3Q6P499 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NIPAL3Q6P499 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.51■□□□□ 0.23
NIPAL3Q6P499 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
NIPAL3Q6P499 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.51■□□□□ 0.23
NIPAL3Q6P499 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
NIPAL3Q6P499 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NIPAL3Q6P499 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
NIPAL3Q6P499 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.51■□□□□ 0.23
NIPAL3Q6P499 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NIPAL3Q6P499 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NIPAL3Q6P499 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NIPAL3Q6P499 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.51■□□□□ 0.23
NIPAL3Q6P499 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.51■□□□□ 0.23
NIPAL3Q6P499 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
NIPAL3Q6P499 AC113347.1-201ENST00000413321 391 ntBASIC16.51■□□□□ 0.23
NIPAL3Q6P499 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NIPAL3Q6P499 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.51■□□□□ 0.23
NIPAL3Q6P499 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
NIPAL3Q6P499 KRT18P23-201ENST00000435622 1283 ntBASIC16.51■□□□□ 0.23
NIPAL3Q6P499 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NIPAL3Q6P499 AC010203.1-204ENST00000548782 407 ntBASIC16.51■□□□□ 0.23
NIPAL3Q6P499 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
NIPAL3Q6P499 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
NIPAL3Q6P499 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NIPAL3Q6P499 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NIPAL3Q6P499 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NIPAL3Q6P499 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.51■□□□□ 0.23
NIPAL3Q6P499 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.51■□□□□ 0.23
NIPAL3Q6P499 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NIPAL3Q6P499 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NIPAL3Q6P499 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
NIPAL3Q6P499 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NIPAL3Q6P499 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NIPAL3Q6P499 GMCL1P1-201ENST00000463439 1581 ntBASIC16.51■□□□□ 0.23
NIPAL3Q6P499 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NIPAL3Q6P499 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.5■□□□□ 0.23
NIPAL3Q6P499 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.5■□□□□ 0.23
NIPAL3Q6P499 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NIPAL3Q6P499 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.5■□□□□ 0.23
NIPAL3Q6P499 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NIPAL3Q6P499 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.5■□□□□ 0.23
NIPAL3Q6P499 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NIPAL3Q6P499 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NIPAL3Q6P499 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.5■□□□□ 0.23
NIPAL3Q6P499 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
NIPAL3Q6P499 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
NIPAL3Q6P499 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.5■□□□□ 0.23
NIPAL3Q6P499 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NIPAL3Q6P499 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NIPAL3Q6P499 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.5■□□□□ 0.23
NIPAL3Q6P499 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.5■□□□□ 0.23
NIPAL3Q6P499 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.5■□□□□ 0.23
NIPAL3Q6P499 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.5■□□□□ 0.23
NIPAL3Q6P499 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
NIPAL3Q6P499 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.5■□□□□ 0.23
NIPAL3Q6P499 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
NIPAL3Q6P499 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NIPAL3Q6P499 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NIPAL3Q6P499 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
NIPAL3Q6P499 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
NIPAL3Q6P499 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
NIPAL3Q6P499 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.5■□□□□ 0.23
NIPAL3Q6P499 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NIPAL3Q6P499 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NIPAL3Q6P499 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NIPAL3Q6P499 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NIPAL3Q6P499 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NIPAL3Q6P499 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
NIPAL3Q6P499 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NIPAL3Q6P499 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NIPAL3Q6P499 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms