Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT40Q6A162 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.01■□□□□ 0.95
KRT40Q6A162 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
KRT40Q6A162 AL359075.1-203ENST00000462729 1002 ntBASIC21.01■□□□□ 0.95
KRT40Q6A162 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
KRT40Q6A162 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.01■□□□□ 0.95
KRT40Q6A162 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.01■□□□□ 0.95
KRT40Q6A162 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.01■□□□□ 0.95
KRT40Q6A162 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT40Q6A162 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KRT40Q6A162 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KRT40Q6A162 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
KRT40Q6A162 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KRT40Q6A162 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT40Q6A162 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KRT40Q6A162 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KRT40Q6A162 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
KRT40Q6A162 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KRT40Q6A162 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT40Q6A162 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KRT40Q6A162 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21■□□□□ 0.95
KRT40Q6A162 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT40Q6A162 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21■□□□□ 0.95
KRT40Q6A162 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT40Q6A162 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT40Q6A162 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
KRT40Q6A162 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT40Q6A162 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21■□□□□ 0.95
KRT40Q6A162 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21■□□□□ 0.95
KRT40Q6A162 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21■□□□□ 0.95
KRT40Q6A162 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21■□□□□ 0.95
KRT40Q6A162 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT40Q6A162 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
KRT40Q6A162 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
KRT40Q6A162 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT40Q6A162 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT40Q6A162 AC067852.2-201ENST00000590513 2313 ntBASIC21■□□□□ 0.95
KRT40Q6A162 AC005332.1-201ENST00000577698 1310 ntBASIC21■□□□□ 0.95
KRT40Q6A162 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC21■□□□□ 0.95
KRT40Q6A162 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT40Q6A162 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KRT40Q6A162 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT40Q6A162 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.99■□□□□ 0.95
KRT40Q6A162 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT40Q6A162 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.99■□□□□ 0.95
KRT40Q6A162 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
KRT40Q6A162 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.99■□□□□ 0.95
KRT40Q6A162 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
KRT40Q6A162 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KRT40Q6A162 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.99■□□□□ 0.95
KRT40Q6A162 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT40Q6A162 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT40Q6A162 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
KRT40Q6A162 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT40Q6A162 RASA4DP-201ENST00000460726 1199 ntBASIC20.99■□□□□ 0.95
KRT40Q6A162 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.99■□□□□ 0.95
KRT40Q6A162 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.99■□□□□ 0.95
KRT40Q6A162 AC005332.8-201ENST00000622750 2735 ntBASIC20.99■□□□□ 0.95
KRT40Q6A162 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
KRT40Q6A162 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT40Q6A162 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT40Q6A162 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KRT40Q6A162 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.99■□□□□ 0.95
KRT40Q6A162 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT40Q6A162 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
KRT40Q6A162 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KRT40Q6A162 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
KRT40Q6A162 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
KRT40Q6A162 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT40Q6A162 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT40Q6A162 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.98■□□□□ 0.95
KRT40Q6A162 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT40Q6A162 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT40Q6A162 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT40Q6A162 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KRT40Q6A162 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.98■□□□□ 0.95
KRT40Q6A162 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT40Q6A162 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KRT40Q6A162 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT40Q6A162 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KRT40Q6A162 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.98■□□□□ 0.95
KRT40Q6A162 AC246785.2-201ENST00000432512 513 ntBASIC20.98■□□□□ 0.95
KRT40Q6A162 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.98■□□□□ 0.95
KRT40Q6A162 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT40Q6A162 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KRT40Q6A162 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
KRT40Q6A162 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT40Q6A162 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.98■□□□□ 0.95
KRT40Q6A162 AC079602.3-201ENST00000623931 403 ntBASIC20.98■□□□□ 0.95
KRT40Q6A162 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.98■□□□□ 0.95
KRT40Q6A162 AL031432.5-201ENST00000641059 760 ntBASIC20.98■□□□□ 0.95
KRT40Q6A162 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT40Q6A162 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT40Q6A162 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT40Q6A162 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.98■□□□□ 0.95
KRT40Q6A162 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
KRT40Q6A162 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KRT40Q6A162 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
KRT40Q6A162 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KRT40Q6A162 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms