Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQA1Q5Y7H0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQA1Q5Y7H0 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
HLA-DQA1Q5Y7H0 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQA1Q5Y7H0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQA1Q5Y7H0 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQA1Q5Y7H0 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.91■□□□□ 0.3
HLA-DQA1Q5Y7H0 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.9■□□□□ 0.3
HLA-DQA1Q5Y7H0 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQA1Q5Y7H0 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQA1Q5Y7H0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQA1Q5Y7H0 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.9■□□□□ 0.3
HLA-DQA1Q5Y7H0 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQA1Q5Y7H0 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQA1Q5Y7H0 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQA1Q5Y7H0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQA1Q5Y7H0 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQA1Q5Y7H0 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQA1Q5Y7H0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.9■□□□□ 0.3
HLA-DQA1Q5Y7H0 AL645929.1-201ENST00000420084 975 ntBASIC16.9■□□□□ 0.3
HLA-DQA1Q5Y7H0 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQA1Q5Y7H0 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.9■□□□□ 0.3
HLA-DQA1Q5Y7H0 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.9■□□□□ 0.3
HLA-DQA1Q5Y7H0 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.9■□□□□ 0.3
HLA-DQA1Q5Y7H0 AL136038.3-201ENST00000561909 1096 ntBASIC16.9■□□□□ 0.3
HLA-DQA1Q5Y7H0 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.9■□□□□ 0.3
HLA-DQA1Q5Y7H0 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQA1Q5Y7H0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQA1Q5Y7H0 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQA1Q5Y7H0 AL024508.2-201ENST00000607749 1894 ntBASIC16.9■□□□□ 0.3
HLA-DQA1Q5Y7H0 AC104581.1-202ENST00000635932 2618 ntBASIC16.9■□□□□ 0.3
HLA-DQA1Q5Y7H0 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
HLA-DQA1Q5Y7H0 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQA1Q5Y7H0 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQA1Q5Y7H0 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQA1Q5Y7H0 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQA1Q5Y7H0 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQA1Q5Y7H0 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HLA-DQA1Q5Y7H0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
HLA-DQA1Q5Y7H0 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
HLA-DQA1Q5Y7H0 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.89■□□□□ 0.3
HLA-DQA1Q5Y7H0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HLA-DQA1Q5Y7H0 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HLA-DQA1Q5Y7H0 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
HLA-DQA1Q5Y7H0 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HLA-DQA1Q5Y7H0 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
HLA-DQA1Q5Y7H0 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQA1Q5Y7H0 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQA1Q5Y7H0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DQA1Q5Y7H0 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQA1Q5Y7H0 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQA1Q5Y7H0 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQA1Q5Y7H0 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQA1Q5Y7H0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQA1Q5Y7H0 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DQA1Q5Y7H0 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DQA1Q5Y7H0 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQA1Q5Y7H0 KRT89P-201ENST00000620027 1478 ntBASIC16.89■□□□□ 0.29
HLA-DQA1Q5Y7H0 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQA1Q5Y7H0 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQA1Q5Y7H0 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQA1Q5Y7H0 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQA1Q5Y7H0 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQA1Q5Y7H0 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQA1Q5Y7H0 MIR662-201ENST00000384847 95 ntBASIC16.89■□□□□ 0.29
HLA-DQA1Q5Y7H0 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.89■□□□□ 0.29
HLA-DQA1Q5Y7H0 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.89■□□□□ 0.29
HLA-DQA1Q5Y7H0 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQA1Q5Y7H0 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DQA1Q5Y7H0 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
HLA-DQA1Q5Y7H0 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.89■□□□□ 0.29
HLA-DQA1Q5Y7H0 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.89■□□□□ 0.29
HLA-DQA1Q5Y7H0 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQA1Q5Y7H0 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQA1Q5Y7H0 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DQA1Q5Y7H0 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQA1Q5Y7H0 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQA1Q5Y7H0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
HLA-DQA1Q5Y7H0 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQA1Q5Y7H0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HLA-DQA1Q5Y7H0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HLA-DQA1Q5Y7H0 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DQA1Q5Y7H0 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DQA1Q5Y7H0 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
HLA-DQA1Q5Y7H0 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DQA1Q5Y7H0 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DQA1Q5Y7H0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.88■□□□□ 0.29
HLA-DQA1Q5Y7H0 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
HLA-DQA1Q5Y7H0 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DQA1Q5Y7H0 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DQA1Q5Y7H0 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DQA1Q5Y7H0 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DQA1Q5Y7H0 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
HLA-DQA1Q5Y7H0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.88■□□□□ 0.29
HLA-DQA1Q5Y7H0 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HLA-DQA1Q5Y7H0 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DQA1Q5Y7H0 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DQA1Q5Y7H0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
HLA-DQA1Q5Y7H0 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DQA1Q5Y7H0 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms