Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LYSMD4Q5XG99 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LYSMD4Q5XG99 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
LYSMD4Q5XG99 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LYSMD4Q5XG99 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.73■□□□□ 0.43
LYSMD4Q5XG99 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LYSMD4Q5XG99 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LYSMD4Q5XG99 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
LYSMD4Q5XG99 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.73■□□□□ 0.43
LYSMD4Q5XG99 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.73■□□□□ 0.43
LYSMD4Q5XG99 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LYSMD4Q5XG99 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.73■□□□□ 0.43
LYSMD4Q5XG99 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LYSMD4Q5XG99 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.73■□□□□ 0.43
LYSMD4Q5XG99 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.73■□□□□ 0.43
LYSMD4Q5XG99 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.73■□□□□ 0.43
LYSMD4Q5XG99 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.73■□□□□ 0.43
LYSMD4Q5XG99 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
LYSMD4Q5XG99 AL022326.1-202ENST00000641533 845 ntBASIC17.73■□□□□ 0.43
LYSMD4Q5XG99 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.73■□□□□ 0.43
LYSMD4Q5XG99 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.73■□□□□ 0.43
LYSMD4Q5XG99 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LYSMD4Q5XG99 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.73■□□□□ 0.43
LYSMD4Q5XG99 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LYSMD4Q5XG99 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LYSMD4Q5XG99 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
LYSMD4Q5XG99 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.73■□□□□ 0.43
LYSMD4Q5XG99 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.72■□□□□ 0.43
LYSMD4Q5XG99 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD4Q5XG99 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.72■□□□□ 0.43
LYSMD4Q5XG99 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
LYSMD4Q5XG99 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD4Q5XG99 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.72■□□□□ 0.43
LYSMD4Q5XG99 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD4Q5XG99 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
LYSMD4Q5XG99 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD4Q5XG99 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD4Q5XG99 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LYSMD4Q5XG99 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.72■□□□□ 0.43
LYSMD4Q5XG99 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD4Q5XG99 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
LYSMD4Q5XG99 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.72■□□□□ 0.43
LYSMD4Q5XG99 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.72■□□□□ 0.43
LYSMD4Q5XG99 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.72■□□□□ 0.43
LYSMD4Q5XG99 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
LYSMD4Q5XG99 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.72■□□□□ 0.43
LYSMD4Q5XG99 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
LYSMD4Q5XG99 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
LYSMD4Q5XG99 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.72■□□□□ 0.43
LYSMD4Q5XG99 MTDHP5-201ENST00000598980 586 ntBASIC17.72■□□□□ 0.43
LYSMD4Q5XG99 AC005593.1-201ENST00000624894 515 ntBASIC17.72■□□□□ 0.43
LYSMD4Q5XG99 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD4Q5XG99 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD4Q5XG99 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD4Q5XG99 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD4Q5XG99 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
LYSMD4Q5XG99 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LYSMD4Q5XG99 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
LYSMD4Q5XG99 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD4Q5XG99 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.71■□□□□ 0.43
LYSMD4Q5XG99 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LYSMD4Q5XG99 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LYSMD4Q5XG99 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LYSMD4Q5XG99 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LYSMD4Q5XG99 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
LYSMD4Q5XG99 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LYSMD4Q5XG99 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LYSMD4Q5XG99 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LYSMD4Q5XG99 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
LYSMD4Q5XG99 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
LYSMD4Q5XG99 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.71■□□□□ 0.43
LYSMD4Q5XG99 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
LYSMD4Q5XG99 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.71■□□□□ 0.43
LYSMD4Q5XG99 AC023274.1-201ENST00000418278 595 ntBASIC17.71■□□□□ 0.43
LYSMD4Q5XG99 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.71■□□□□ 0.43
LYSMD4Q5XG99 AC007967.3-201ENST00000434308 558 ntBASIC17.71■□□□□ 0.43
LYSMD4Q5XG99 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.71■□□□□ 0.43
LYSMD4Q5XG99 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.71■□□□□ 0.43
LYSMD4Q5XG99 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.71■□□□□ 0.43
LYSMD4Q5XG99 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LYSMD4Q5XG99 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
LYSMD4Q5XG99 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.71■□□□□ 0.43
LYSMD4Q5XG99 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.71■□□□□ 0.43
LYSMD4Q5XG99 AC006557.2-201ENST00000592985 1240 ntBASIC17.71■□□□□ 0.43
LYSMD4Q5XG99 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LYSMD4Q5XG99 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.71■□□□□ 0.43
LYSMD4Q5XG99 PGM5P2-202ENST00000637225 1043 ntBASIC17.71■□□□□ 0.43
LYSMD4Q5XG99 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LYSMD4Q5XG99 AC079776.2-201ENST00000641154 1609 ntBASIC17.71■□□□□ 0.43
LYSMD4Q5XG99 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
LYSMD4Q5XG99 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.71■□□□□ 0.43
LYSMD4Q5XG99 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LYSMD4Q5XG99 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LYSMD4Q5XG99 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
LYSMD4Q5XG99 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
LYSMD4Q5XG99 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.71■□□□□ 0.42
LYSMD4Q5XG99 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.71■□□□□ 0.42
LYSMD4Q5XG99 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LYSMD4Q5XG99 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.7■□□□□ 0.42
LYSMD4Q5XG99 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms