Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF220Q5VTB9 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF220Q5VTB9 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF220Q5VTB9 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF220Q5VTB9 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RNF220Q5VTB9 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF220Q5VTB9 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RNF220Q5VTB9 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.49■□□□□ 0.39
RNF220Q5VTB9 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RNF220Q5VTB9 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.49■□□□□ 0.39
RNF220Q5VTB9 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.49■□□□□ 0.39
RNF220Q5VTB9 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.49■□□□□ 0.39
RNF220Q5VTB9 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF220Q5VTB9 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RNF220Q5VTB9 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF220Q5VTB9 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF220Q5VTB9 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.49■□□□□ 0.39
RNF220Q5VTB9 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.49■□□□□ 0.39
RNF220Q5VTB9 AC004980.1-204ENST00000429707 299 ntBASIC17.49■□□□□ 0.39
RNF220Q5VTB9 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
RNF220Q5VTB9 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.49■□□□□ 0.39
RNF220Q5VTB9 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.49■□□□□ 0.39
RNF220Q5VTB9 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF220Q5VTB9 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.49■□□□□ 0.39
RNF220Q5VTB9 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RNF220Q5VTB9 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.49■□□□□ 0.39
RNF220Q5VTB9 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF220Q5VTB9 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF220Q5VTB9 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
RNF220Q5VTB9 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF220Q5VTB9 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.49■□□□□ 0.39
RNF220Q5VTB9 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF220Q5VTB9 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF220Q5VTB9 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF220Q5VTB9 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF220Q5VTB9 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF220Q5VTB9 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF220Q5VTB9 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF220Q5VTB9 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF220Q5VTB9 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF220Q5VTB9 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.49■□□□□ 0.39
RNF220Q5VTB9 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF220Q5VTB9 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF220Q5VTB9 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF220Q5VTB9 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF220Q5VTB9 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RNF220Q5VTB9 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF220Q5VTB9 HTR7P1-201ENST00000538670 1336 ntBASIC17.48■□□□□ 0.39
RNF220Q5VTB9 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.48■□□□□ 0.39
RNF220Q5VTB9 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF220Q5VTB9 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF220Q5VTB9 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF220Q5VTB9 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF220Q5VTB9 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
RNF220Q5VTB9 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF220Q5VTB9 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF220Q5VTB9 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF220Q5VTB9 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF220Q5VTB9 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF220Q5VTB9 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF220Q5VTB9 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF220Q5VTB9 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF220Q5VTB9 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF220Q5VTB9 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF220Q5VTB9 KSR1P1-201ENST00000446298 240 ntBASIC17.48■□□□□ 0.39
RNF220Q5VTB9 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF220Q5VTB9 AP002982.1-201ENST00000492365 877 ntBASIC17.48■□□□□ 0.39
RNF220Q5VTB9 C1QBPP2-201ENST00000528754 825 ntBASIC17.48■□□□□ 0.39
RNF220Q5VTB9 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF220Q5VTB9 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.48■□□□□ 0.39
RNF220Q5VTB9 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.48■□□□□ 0.39
RNF220Q5VTB9 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.48■□□□□ 0.39
RNF220Q5VTB9 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
RNF220Q5VTB9 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.48■□□□□ 0.39
RNF220Q5VTB9 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF220Q5VTB9 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF220Q5VTB9 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF220Q5VTB9 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF220Q5VTB9 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF220Q5VTB9 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF220Q5VTB9 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF220Q5VTB9 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF220Q5VTB9 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF220Q5VTB9 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF220Q5VTB9 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF220Q5VTB9 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF220Q5VTB9 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF220Q5VTB9 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF220Q5VTB9 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.47■□□□□ 0.39
RNF220Q5VTB9 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.47■□□□□ 0.39
RNF220Q5VTB9 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF220Q5VTB9 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF220Q5VTB9 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF220Q5VTB9 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RNF220Q5VTB9 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
RNF220Q5VTB9 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF220Q5VTB9 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF220Q5VTB9 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.47■□□□□ 0.39
RNF220Q5VTB9 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.47■□□□□ 0.39
RNF220Q5VTB9 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms