Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CDC42BPAQ5VT25 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
CDC42BPAQ5VT25 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CDC42BPAQ5VT25 COA5-202ENST00000409997 557 ntTSL 4 BASIC27.27■■□□□ 1.96
CDC42BPAQ5VT25 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC27.27■■□□□ 1.96
CDC42BPAQ5VT25 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC27.27■■□□□ 1.96
CDC42BPAQ5VT25 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC27.27■■□□□ 1.96
CDC42BPAQ5VT25 AL355385.1-201ENST00000606123 409 ntBASIC27.27■■□□□ 1.96
CDC42BPAQ5VT25 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC27.26■■□□□ 1.96
CDC42BPAQ5VT25 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CDC42BPAQ5VT25 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
CDC42BPAQ5VT25 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC27.26■■□□□ 1.95
CDC42BPAQ5VT25 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.95
CDC42BPAQ5VT25 NCF1C-201ENST00000438382 1427 ntBASIC27.26■■□□□ 1.95
CDC42BPAQ5VT25 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CDC42BPAQ5VT25 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
CDC42BPAQ5VT25 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
CDC42BPAQ5VT25 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC27.26■■□□□ 1.95
CDC42BPAQ5VT25 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC27.26■■□□□ 1.95
CDC42BPAQ5VT25 AC112482.1-201ENST00000492080 688 ntBASIC27.26■■□□□ 1.95
CDC42BPAQ5VT25 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CDC42BPAQ5VT25 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC27.26■■□□□ 1.95
CDC42BPAQ5VT25 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CDC42BPAQ5VT25 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
CDC42BPAQ5VT25 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CDC42BPAQ5VT25 AC004817.3-201ENST00000602957 2129 ntBASIC27.26■■□□□ 1.95
CDC42BPAQ5VT25 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CDC42BPAQ5VT25 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CDC42BPAQ5VT25 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC27.26■■□□□ 1.95
CDC42BPAQ5VT25 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CDC42BPAQ5VT25 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
CDC42BPAQ5VT25 AL031598.1-201ENST00000561511 1773 ntBASIC27.25■■□□□ 1.95
CDC42BPAQ5VT25 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC27.25■■□□□ 1.95
CDC42BPAQ5VT25 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
CDC42BPAQ5VT25 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC27.25■■□□□ 1.95
CDC42BPAQ5VT25 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CDC42BPAQ5VT25 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CDC42BPAQ5VT25 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC27.25■■□□□ 1.95
CDC42BPAQ5VT25 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC27.25■■□□□ 1.95
CDC42BPAQ5VT25 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC27.25■■□□□ 1.95
CDC42BPAQ5VT25 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CDC42BPAQ5VT25 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC27.24■■□□□ 1.95
CDC42BPAQ5VT25 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC27.24■■□□□ 1.95
CDC42BPAQ5VT25 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC27.24■■□□□ 1.95
CDC42BPAQ5VT25 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC27.24■■□□□ 1.95
CDC42BPAQ5VT25 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC27.24■■□□□ 1.95
CDC42BPAQ5VT25 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
CDC42BPAQ5VT25 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC27.24■■□□□ 1.95
CDC42BPAQ5VT25 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CDC42BPAQ5VT25 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CDC42BPAQ5VT25 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC27.24■■□□□ 1.95
CDC42BPAQ5VT25 RPS8P6-201ENST00000426177 609 ntBASIC27.24■■□□□ 1.95
CDC42BPAQ5VT25 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC27.24■■□□□ 1.95
CDC42BPAQ5VT25 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC27.24■■□□□ 1.95
CDC42BPAQ5VT25 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC27.24■■□□□ 1.95
CDC42BPAQ5VT25 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC27.24■■□□□ 1.95
CDC42BPAQ5VT25 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CDC42BPAQ5VT25 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
CDC42BPAQ5VT25 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CDC42BPAQ5VT25 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CDC42BPAQ5VT25 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CDC42BPAQ5VT25 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CDC42BPAQ5VT25 AC027796.2-201ENST00000575326 344 ntBASIC27.23■■□□□ 1.95
CDC42BPAQ5VT25 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
CDC42BPAQ5VT25 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CDC42BPAQ5VT25 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CDC42BPAQ5VT25 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
CDC42BPAQ5VT25 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC27.23■■□□□ 1.95
CDC42BPAQ5VT25 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CDC42BPAQ5VT25 AC126763.1-201ENST00000552015 2118 ntBASIC27.23■■□□□ 1.95
CDC42BPAQ5VT25 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CDC42BPAQ5VT25 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CDC42BPAQ5VT25 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CDC42BPAQ5VT25 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CDC42BPAQ5VT25 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CDC42BPAQ5VT25 KRT18P2-201ENST00000447938 1258 ntBASIC27.22■■□□□ 1.95
CDC42BPAQ5VT25 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC27.22■■□□□ 1.95
CDC42BPAQ5VT25 PGM5P2-202ENST00000637225 1043 ntBASIC27.22■■□□□ 1.95
CDC42BPAQ5VT25 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC27.22■■□□□ 1.95
CDC42BPAQ5VT25 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CDC42BPAQ5VT25 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CDC42BPAQ5VT25 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CDC42BPAQ5VT25 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC27.22■■□□□ 1.95
CDC42BPAQ5VT25 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CDC42BPAQ5VT25 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CDC42BPAQ5VT25 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CDC42BPAQ5VT25 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CDC42BPAQ5VT25 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CDC42BPAQ5VT25 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC27.21■■□□□ 1.95
CDC42BPAQ5VT25 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC27.21■■□□□ 1.95
CDC42BPAQ5VT25 RIN3-211ENST00000557762 517 ntTSL 3 BASIC27.21■■□□□ 1.95
CDC42BPAQ5VT25 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC27.21■■□□□ 1.95
CDC42BPAQ5VT25 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
CDC42BPAQ5VT25 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
CDC42BPAQ5VT25 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC27.21■■□□□ 1.95
CDC42BPAQ5VT25 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC27.21■■□□□ 1.95
CDC42BPAQ5VT25 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
CDC42BPAQ5VT25 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CDC42BPAQ5VT25 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
CDC42BPAQ5VT25 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC27.21■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms