Protein–RNA interactions for Protein: Q53S08

RAB6C, Rab6C, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6CQ53S08 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB6CQ53S08 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.85■□□□□ 0.61
RAB6CQ53S08 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB6CQ53S08 FLJ13224-201ENST00000313737 1514 ntBASIC18.84■□□□□ 0.61
RAB6CQ53S08 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.84■□□□□ 0.61
RAB6CQ53S08 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAB6CQ53S08 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB6CQ53S08 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB6CQ53S08 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
RAB6CQ53S08 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB6CQ53S08 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAB6CQ53S08 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB6CQ53S08 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
RAB6CQ53S08 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RAB6CQ53S08 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.84■□□□□ 0.61
RAB6CQ53S08 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAB6CQ53S08 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.84■□□□□ 0.61
RAB6CQ53S08 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RAB6CQ53S08 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB6CQ53S08 IGHGP-201ENST00000390555 1178 ntBASIC18.84■□□□□ 0.61
RAB6CQ53S08 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAB6CQ53S08 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.84■□□□□ 0.61
RAB6CQ53S08 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.84■□□□□ 0.61
RAB6CQ53S08 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.84■□□□□ 0.61
RAB6CQ53S08 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.84■□□□□ 0.61
RAB6CQ53S08 AP003733.1-201ENST00000491725 852 ntBASIC18.84■□□□□ 0.61
RAB6CQ53S08 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.84■□□□□ 0.61
RAB6CQ53S08 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.84■□□□□ 0.61
RAB6CQ53S08 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.84■□□□□ 0.61
RAB6CQ53S08 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.84■□□□□ 0.61
RAB6CQ53S08 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.84■□□□□ 0.61
RAB6CQ53S08 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.84■□□□□ 0.61
RAB6CQ53S08 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB6CQ53S08 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB6CQ53S08 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB6CQ53S08 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB6CQ53S08 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB6CQ53S08 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAB6CQ53S08 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB6CQ53S08 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB6CQ53S08 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAB6CQ53S08 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAB6CQ53S08 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
RAB6CQ53S08 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.83■□□□□ 0.61
RAB6CQ53S08 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAB6CQ53S08 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAB6CQ53S08 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAB6CQ53S08 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAB6CQ53S08 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.61
RAB6CQ53S08 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.83■□□□□ 0.61
RAB6CQ53S08 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB6CQ53S08 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.83■□□□□ 0.6
RAB6CQ53S08 FAM86EP-206ENST00000510506 987 ntBASIC18.83■□□□□ 0.6
RAB6CQ53S08 AC005332.3-201ENST00000589904 676 ntBASIC18.83■□□□□ 0.6
RAB6CQ53S08 AL445228.2-201ENST00000605589 952 ntBASIC18.83■□□□□ 0.6
RAB6CQ53S08 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.83■□□□□ 0.6
RAB6CQ53S08 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RAB6CQ53S08 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
RAB6CQ53S08 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.83■□□□□ 0.6
RAB6CQ53S08 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB6CQ53S08 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB6CQ53S08 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB6CQ53S08 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.83■□□□□ 0.6
RAB6CQ53S08 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RAB6CQ53S08 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RAB6CQ53S08 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.83■□□□□ 0.6
RAB6CQ53S08 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB6CQ53S08 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB6CQ53S08 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB6CQ53S08 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.82■□□□□ 0.6
RAB6CQ53S08 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RAB6CQ53S08 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB6CQ53S08 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RAB6CQ53S08 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB6CQ53S08 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.82■□□□□ 0.6
RAB6CQ53S08 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB6CQ53S08 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RAB6CQ53S08 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB6CQ53S08 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.82■□□□□ 0.6
RAB6CQ53S08 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.82■□□□□ 0.6
RAB6CQ53S08 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.82■□□□□ 0.6
RAB6CQ53S08 AC113404.2-201ENST00000507884 177 ntBASIC18.82■□□□□ 0.6
RAB6CQ53S08 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.82■□□□□ 0.6
RAB6CQ53S08 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.82■□□□□ 0.6
RAB6CQ53S08 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.82■□□□□ 0.6
RAB6CQ53S08 AC010331.1-201ENST00000611423 582 ntBASIC18.82■□□□□ 0.6
RAB6CQ53S08 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB6CQ53S08 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB6CQ53S08 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RAB6CQ53S08 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB6CQ53S08 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB6CQ53S08 KRT89P-201ENST00000620027 1478 ntBASIC18.82■□□□□ 0.6
RAB6CQ53S08 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.82■□□□□ 0.6
RAB6CQ53S08 PCDHB18P-201ENST00000524813 2368 ntBASIC18.82■□□□□ 0.6
RAB6CQ53S08 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB6CQ53S08 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB6CQ53S08 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RAB6CQ53S08 Z83836.1-201ENST00000624605 1642 ntBASIC18.82■□□□□ 0.6
RAB6CQ53S08 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB6CQ53S08 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms