Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01559Q495D7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01559Q495D7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC13.59□□□□□ -0.23
LINC01559Q495D7 PSMC1P2-201ENST00000423961 1204 ntBASIC13.59□□□□□ -0.23
LINC01559Q495D7 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC01559Q495D7 MAP2K4P1-201ENST00000438453 1195 ntBASIC13.59□□□□□ -0.23
LINC01559Q495D7 AC091390.4-202ENST00000476426 537 ntBASIC13.59□□□□□ -0.23
LINC01559Q495D7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC13.59□□□□□ -0.23
LINC01559Q495D7 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC13.59□□□□□ -0.23
LINC01559Q495D7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC13.59□□□□□ -0.23
LINC01559Q495D7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
LINC01559Q495D7 AC122134.1-202ENST00000569111 1201 ntBASIC13.59□□□□□ -0.23
LINC01559Q495D7 AC069544.1-201ENST00000609399 999 ntBASIC13.59□□□□□ -0.23
LINC01559Q495D7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01559Q495D7 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC13.59□□□□□ -0.23
LINC01559Q495D7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01559Q495D7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC01559Q495D7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
LINC01559Q495D7 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
LINC01559Q495D7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01559Q495D7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01559Q495D7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC01559Q495D7 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01559Q495D7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01559Q495D7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01559Q495D7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01559Q495D7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC01559Q495D7 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
LINC01559Q495D7 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
LINC01559Q495D7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01559Q495D7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01559Q495D7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01559Q495D7 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
LINC01559Q495D7 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01559Q495D7 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01559Q495D7 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
LINC01559Q495D7 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.23
LINC01559Q495D7 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LINC01559Q495D7 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
LINC01559Q495D7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
LINC01559Q495D7 PHGDH-209ENST00000641074 1780 ntBASIC13.58□□□□□ -0.23
LINC01559Q495D7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
LINC01559Q495D7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
LINC01559Q495D7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
LINC01559Q495D7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01559Q495D7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01559Q495D7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01559Q495D7 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01559Q495D7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01559Q495D7 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC13.58□□□□□ -0.24
LINC01559Q495D7 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01559Q495D7 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC01559Q495D7 AC004951.3-201ENST00000418645 1148 ntBASIC13.58□□□□□ -0.24
LINC01559Q495D7 NIFKP9-201ENST00000419265 221 ntBASIC13.58□□□□□ -0.24
LINC01559Q495D7 KRT17P3-201ENST00000420566 1262 ntBASIC13.58□□□□□ -0.24
LINC01559Q495D7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC13.58□□□□□ -0.24
LINC01559Q495D7 CKBP1-201ENST00000565489 1086 ntBASIC13.58□□□□□ -0.24
LINC01559Q495D7 AC022148.2-201ENST00000586176 560 ntBASIC13.58□□□□□ -0.24
LINC01559Q495D7 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC13.58□□□□□ -0.24
LINC01559Q495D7 AC008403.3-201ENST00000598924 454 ntBASIC13.58□□□□□ -0.24
LINC01559Q495D7 CSNK1A1-209ENST00000606299 1075 ntTSL 3 BASIC13.58□□□□□ -0.24
LINC01559Q495D7 AL109924.4-201ENST00000623089 670 ntBASIC13.58□□□□□ -0.24
LINC01559Q495D7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC13.58□□□□□ -0.24
LINC01559Q495D7 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC13.58□□□□□ -0.24
LINC01559Q495D7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC13.58□□□□□ -0.24
LINC01559Q495D7 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC13.58□□□□□ -0.24
LINC01559Q495D7 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01559Q495D7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
LINC01559Q495D7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01559Q495D7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
LINC01559Q495D7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01559Q495D7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01559Q495D7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
LINC01559Q495D7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01559Q495D7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01559Q495D7 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
LINC01559Q495D7 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01559Q495D7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
LINC01559Q495D7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC13.58□□□□□ -0.24
LINC01559Q495D7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
LINC01559Q495D7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
LINC01559Q495D7 AC006116.8-202ENST00000587620 1550 ntBASIC13.58□□□□□ -0.24
LINC01559Q495D7 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01559Q495D7 PKD1P5-201ENST00000532415 10291 ntBASIC13.58□□□□□ -0.24
LINC01559Q495D7 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
LINC01559Q495D7 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01559Q495D7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01559Q495D7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01559Q495D7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01559Q495D7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01559Q495D7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01559Q495D7 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC13.57□□□□□ -0.24
LINC01559Q495D7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC13.57□□□□□ -0.24
LINC01559Q495D7 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01559Q495D7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01559Q495D7 AL390039.1-201ENST00000399148 611 ntBASIC13.57□□□□□ -0.24
LINC01559Q495D7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC13.57□□□□□ -0.24
LINC01559Q495D7 AC239809.2-201ENST00000415381 517 ntBASIC13.57□□□□□ -0.24
LINC01559Q495D7 SETP12-201ENST00000514068 805 ntBASIC13.57□□□□□ -0.24
LINC01559Q495D7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms