Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 VN2R19P-201ENST00000442399 1052 ntBASIC17.49■□□□□ 0.39
RSPO4Q2I0M5 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.49■□□□□ 0.39
RSPO4Q2I0M5 FAM86GP-201ENST00000448322 971 ntBASIC17.49■□□□□ 0.39
RSPO4Q2I0M5 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.49■□□□□ 0.39
RSPO4Q2I0M5 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RSPO4Q2I0M5 AC093214.1-201ENST00000511688 1107 ntBASIC17.49■□□□□ 0.39
RSPO4Q2I0M5 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.49■□□□□ 0.39
RSPO4Q2I0M5 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.49■□□□□ 0.39
RSPO4Q2I0M5 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.49■□□□□ 0.39
RSPO4Q2I0M5 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.49■□□□□ 0.39
RSPO4Q2I0M5 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RSPO4Q2I0M5 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.49■□□□□ 0.39
RSPO4Q2I0M5 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.49■□□□□ 0.39
RSPO4Q2I0M5 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RSPO4Q2I0M5 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.49■□□□□ 0.39
RSPO4Q2I0M5 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RSPO4Q2I0M5 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RSPO4Q2I0M5 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RSPO4Q2I0M5 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RSPO4Q2I0M5 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RSPO4Q2I0M5 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RSPO4Q2I0M5 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RSPO4Q2I0M5 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.48■□□□□ 0.39
RSPO4Q2I0M5 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RSPO4Q2I0M5 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.48■□□□□ 0.39
RSPO4Q2I0M5 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.48■□□□□ 0.39
RSPO4Q2I0M5 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.48■□□□□ 0.39
RSPO4Q2I0M5 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RSPO4Q2I0M5 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RSPO4Q2I0M5 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.48■□□□□ 0.39
RSPO4Q2I0M5 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RSPO4Q2I0M5 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RSPO4Q2I0M5 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.48■□□□□ 0.39
RSPO4Q2I0M5 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.48■□□□□ 0.39
RSPO4Q2I0M5 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.48■□□□□ 0.39
RSPO4Q2I0M5 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.48■□□□□ 0.39
RSPO4Q2I0M5 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RSPO4Q2I0M5 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RSPO4Q2I0M5 INGX-202ENST00000489074 768 ntBASIC17.48■□□□□ 0.39
RSPO4Q2I0M5 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RSPO4Q2I0M5 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.48■□□□□ 0.39
RSPO4Q2I0M5 TERF1P3-201ENST00000505638 1227 ntBASIC17.48■□□□□ 0.39
RSPO4Q2I0M5 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.48■□□□□ 0.39
RSPO4Q2I0M5 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.48■□□□□ 0.39
RSPO4Q2I0M5 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.48■□□□□ 0.39
RSPO4Q2I0M5 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RSPO4Q2I0M5 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.48■□□□□ 0.39
RSPO4Q2I0M5 AC008687.5-201ENST00000593746 558 ntBASIC17.48■□□□□ 0.39
RSPO4Q2I0M5 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.48■□□□□ 0.39
RSPO4Q2I0M5 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.48■□□□□ 0.39
RSPO4Q2I0M5 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.48■□□□□ 0.39
RSPO4Q2I0M5 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RSPO4Q2I0M5 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RSPO4Q2I0M5 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RSPO4Q2I0M5 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RSPO4Q2I0M5 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RSPO4Q2I0M5 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RSPO4Q2I0M5 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.47■□□□□ 0.39
RSPO4Q2I0M5 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.47■□□□□ 0.39
RSPO4Q2I0M5 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RSPO4Q2I0M5 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RSPO4Q2I0M5 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RSPO4Q2I0M5 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RSPO4Q2I0M5 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.47■□□□□ 0.39
RSPO4Q2I0M5 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.47■□□□□ 0.39
RSPO4Q2I0M5 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.47■□□□□ 0.39
RSPO4Q2I0M5 AC245100.3-201ENST00000441281 285 ntBASIC17.47■□□□□ 0.39
RSPO4Q2I0M5 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.47■□□□□ 0.39
RSPO4Q2I0M5 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.47■□□□□ 0.39
RSPO4Q2I0M5 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.47■□□□□ 0.39
RSPO4Q2I0M5 AC093520.2-201ENST00000561830 333 ntBASIC17.47■□□□□ 0.39
RSPO4Q2I0M5 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.47■□□□□ 0.39
RSPO4Q2I0M5 AL359881.2-201ENST00000602973 570 ntBASIC17.47■□□□□ 0.39
RSPO4Q2I0M5 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.47■□□□□ 0.39
RSPO4Q2I0M5 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.47■□□□□ 0.39
RSPO4Q2I0M5 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.47■□□□□ 0.39
RSPO4Q2I0M5 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RSPO4Q2I0M5 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RSPO4Q2I0M5 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RSPO4Q2I0M5 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RSPO4Q2I0M5 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RSPO4Q2I0M5 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RSPO4Q2I0M5 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RSPO4Q2I0M5 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RSPO4Q2I0M5 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RSPO4Q2I0M5 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.46■□□□□ 0.39
RSPO4Q2I0M5 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
RSPO4Q2I0M5 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RSPO4Q2I0M5 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RSPO4Q2I0M5 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
RSPO4Q2I0M5 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RSPO4Q2I0M5 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.46■□□□□ 0.39
RSPO4Q2I0M5 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RSPO4Q2I0M5 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
RSPO4Q2I0M5 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RSPO4Q2I0M5 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RSPO4Q2I0M5 AC236430.1-201ENST00000402231 743 ntBASIC17.46■□□□□ 0.39
RSPO4Q2I0M5 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.46■□□□□ 0.39
RSPO4Q2I0M5 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.46■□□□□ 0.39
RSPO4Q2I0M5 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms