Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CDH17Q12864 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CDH17Q12864 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CDH17Q12864 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDH17Q12864 LETM1P2-201ENST00000597330 2178 ntBASIC18.33■□□□□ 0.52
CDH17Q12864 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH17Q12864 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH17Q12864 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH17Q12864 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDH17Q12864 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.33■□□□□ 0.52
CDH17Q12864 AC010203.1-204ENST00000548782 407 ntBASIC18.33■□□□□ 0.52
CDH17Q12864 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDH17Q12864 AC012306.2-201ENST00000609350 630 ntBASIC18.33■□□□□ 0.52
CDH17Q12864 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.33■□□□□ 0.52
CDH17Q12864 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
CDH17Q12864 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CDH17Q12864 AL023973.1-201ENST00000624619 620 ntBASIC18.33■□□□□ 0.52
CDH17Q12864 AC097493.4-201ENST00000641197 219 ntBASIC18.33■□□□□ 0.52
CDH17Q12864 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.33■□□□□ 0.52
CDH17Q12864 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH17Q12864 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CDH17Q12864 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.33■□□□□ 0.52
CDH17Q12864 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDH17Q12864 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.32■□□□□ 0.52
CDH17Q12864 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH17Q12864 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.32■□□□□ 0.52
CDH17Q12864 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH17Q12864 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH17Q12864 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH17Q12864 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.32■□□□□ 0.52
CDH17Q12864 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH17Q12864 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CDH17Q12864 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.32■□□□□ 0.52
CDH17Q12864 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH17Q12864 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH17Q12864 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.32■□□□□ 0.52
CDH17Q12864 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.32■□□□□ 0.52
CDH17Q12864 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH17Q12864 AC140113.3-201ENST00000605663 199 ntBASIC18.32■□□□□ 0.52
CDH17Q12864 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.32■□□□□ 0.52
CDH17Q12864 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH17Q12864 KRT18P55-202ENST00000578578 1546 ntBASIC18.32■□□□□ 0.52
CDH17Q12864 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH17Q12864 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH17Q12864 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH17Q12864 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH17Q12864 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.31■□□□□ 0.52
CDH17Q12864 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH17Q12864 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH17Q12864 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
CDH17Q12864 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.31■□□□□ 0.52
CDH17Q12864 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH17Q12864 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH17Q12864 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH17Q12864 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CDH17Q12864 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH17Q12864 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.31■□□□□ 0.52
CDH17Q12864 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CDH17Q12864 AC113347.1-201ENST00000413321 391 ntBASIC18.31■□□□□ 0.52
CDH17Q12864 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH17Q12864 COX11P1-201ENST00000489116 835 ntBASIC18.31■□□□□ 0.52
CDH17Q12864 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CDH17Q12864 DUTP2-201ENST00000519164 463 ntBASIC18.31■□□□□ 0.52
CDH17Q12864 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CDH17Q12864 AC005363.2-201ENST00000618631 242 ntBASIC18.31■□□□□ 0.52
CDH17Q12864 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH17Q12864 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH17Q12864 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH17Q12864 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH17Q12864 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.31■□□□□ 0.52
CDH17Q12864 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH17Q12864 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.31■□□□□ 0.52
CDH17Q12864 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.31■□□□□ 0.52
CDH17Q12864 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH17Q12864 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH17Q12864 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH17Q12864 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH17Q12864 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH17Q12864 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH17Q12864 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH17Q12864 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
CDH17Q12864 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH17Q12864 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH17Q12864 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH17Q12864 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CDH17Q12864 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH17Q12864 AL137013.1-201ENST00000432946 1228 ntBASIC18.3■□□□□ 0.52
CDH17Q12864 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.3■□□□□ 0.52
CDH17Q12864 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
CDH17Q12864 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.3■□□□□ 0.52
CDH17Q12864 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH17Q12864 AC132938.6-201ENST00000623828 1655 ntBASIC18.3■□□□□ 0.52
CDH17Q12864 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH17Q12864 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
CDH17Q12864 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH17Q12864 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH17Q12864 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CDH17Q12864 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH17Q12864 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDH17Q12864 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms