Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBXN1Q04323 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.87■□□□□ 0.77
UBXN1Q04323 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBXN1Q04323 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
UBXN1Q04323 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
UBXN1Q04323 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.87■□□□□ 0.77
UBXN1Q04323 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
UBXN1Q04323 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.87■□□□□ 0.77
UBXN1Q04323 AC009065.1-201ENST00000564055 1225 ntBASIC19.87■□□□□ 0.77
UBXN1Q04323 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.87■□□□□ 0.77
UBXN1Q04323 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.87■□□□□ 0.77
UBXN1Q04323 AL024508.2-201ENST00000607749 1894 ntBASIC19.87■□□□□ 0.77
UBXN1Q04323 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.87■□□□□ 0.77
UBXN1Q04323 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
UBXN1Q04323 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBXN1Q04323 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBXN1Q04323 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
UBXN1Q04323 AC139713.2-201ENST00000641328 2723 ntBASIC19.87■□□□□ 0.77
UBXN1Q04323 PKD1P1-201ENST00000458669 6805 ntBASIC19.87■□□□□ 0.77
UBXN1Q04323 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UBXN1Q04323 AC092338.2-201ENST00000568827 1415 ntBASIC19.86■□□□□ 0.77
UBXN1Q04323 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.86■□□□□ 0.77
UBXN1Q04323 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.86■□□□□ 0.77
UBXN1Q04323 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBXN1Q04323 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBXN1Q04323 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBXN1Q04323 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.86■□□□□ 0.77
UBXN1Q04323 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.86■□□□□ 0.77
UBXN1Q04323 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.86■□□□□ 0.77
UBXN1Q04323 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
UBXN1Q04323 AC104390.1-201ENST00000555663 520 ntBASIC19.86■□□□□ 0.77
UBXN1Q04323 AC112497.1-201ENST00000624824 639 ntBASIC19.86■□□□□ 0.77
UBXN1Q04323 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBXN1Q04323 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UBXN1Q04323 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.86■□□□□ 0.77
UBXN1Q04323 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
UBXN1Q04323 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
UBXN1Q04323 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBXN1Q04323 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBXN1Q04323 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBXN1Q04323 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBXN1Q04323 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBXN1Q04323 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
UBXN1Q04323 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBXN1Q04323 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBXN1Q04323 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
UBXN1Q04323 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.85■□□□□ 0.77
UBXN1Q04323 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.85■□□□□ 0.77
UBXN1Q04323 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBXN1Q04323 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.85■□□□□ 0.77
UBXN1Q04323 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBXN1Q04323 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBXN1Q04323 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBXN1Q04323 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
UBXN1Q04323 CCR12P-201ENST00000446203 998 ntBASIC19.85■□□□□ 0.77
UBXN1Q04323 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.85■□□□□ 0.77
UBXN1Q04323 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.85■□□□□ 0.77
UBXN1Q04323 BX088651.1-201ENST00000540551 451 ntBASIC19.85■□□□□ 0.77
UBXN1Q04323 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.85■□□□□ 0.77
UBXN1Q04323 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.85■□□□□ 0.77
UBXN1Q04323 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.85■□□□□ 0.77
UBXN1Q04323 AP000525.1-201ENST00000608286 694 ntBASIC19.85■□□□□ 0.77
UBXN1Q04323 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.85■□□□□ 0.77
UBXN1Q04323 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
UBXN1Q04323 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
UBXN1Q04323 AL645608.8-201ENST00000606034 2086 ntBASIC19.85■□□□□ 0.77
UBXN1Q04323 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBXN1Q04323 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBXN1Q04323 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.85■□□□□ 0.77
UBXN1Q04323 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBXN1Q04323 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBXN1Q04323 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBXN1Q04323 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBXN1Q04323 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UBXN1Q04323 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
UBXN1Q04323 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBXN1Q04323 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBXN1Q04323 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBXN1Q04323 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBXN1Q04323 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBXN1Q04323 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.84■□□□□ 0.77
UBXN1Q04323 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
UBXN1Q04323 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
UBXN1Q04323 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBXN1Q04323 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.84■□□□□ 0.77
UBXN1Q04323 AL390955.1-201ENST00000428694 934 ntBASIC19.84■□□□□ 0.77
UBXN1Q04323 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.84■□□□□ 0.77
UBXN1Q04323 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.84■□□□□ 0.77
UBXN1Q04323 PP12613-201ENST00000424958 2230 ntBASIC19.84■□□□□ 0.77
UBXN1Q04323 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
UBXN1Q04323 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBXN1Q04323 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.84■□□□□ 0.77
UBXN1Q04323 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
UBXN1Q04323 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UBXN1Q04323 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
UBXN1Q04323 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UBXN1Q04323 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UBXN1Q04323 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.84■□□□□ 0.77
UBXN1Q04323 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UBXN1Q04323 AC012313.1-201ENST00000593393 3059 ntBASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms