Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBA52P62987 AC011270.2-201ENST00000624293 2550 ntBASIC15.67■□□□□ 0.1
UBA52P62987 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBA52P62987 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
UBA52P62987 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBA52P62987 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.66■□□□□ 0.1
UBA52P62987 TFP1-202ENST00000475455 1573 ntBASIC15.66■□□□□ 0.1
UBA52P62987 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBA52P62987 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
UBA52P62987 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBA52P62987 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
UBA52P62987 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UBA52P62987 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBA52P62987 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBA52P62987 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.66■□□□□ 0.1
UBA52P62987 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBA52P62987 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBA52P62987 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBA52P62987 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBA52P62987 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBA52P62987 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.66■□□□□ 0.1
UBA52P62987 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.66■□□□□ 0.1
UBA52P62987 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
UBA52P62987 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC15.66■□□□□ 0.1
UBA52P62987 SLC25A1P4-201ENST00000567977 778 ntBASIC15.66■□□□□ 0.1
UBA52P62987 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
UBA52P62987 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.66■□□□□ 0.1
UBA52P62987 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.66■□□□□ 0.1
UBA52P62987 FAM87A-204ENST00000613235 858 ntBASIC15.66■□□□□ 0.1
UBA52P62987 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
UBA52P62987 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
UBA52P62987 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBA52P62987 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
UBA52P62987 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UBA52P62987 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBA52P62987 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UBA52P62987 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.66■□□□□ 0.1
UBA52P62987 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBA52P62987 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.66■□□□□ 0.1
UBA52P62987 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
UBA52P62987 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC15.66■□□□□ 0.1
UBA52P62987 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UBA52P62987 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBA52P62987 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBA52P62987 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBA52P62987 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBA52P62987 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.65■□□□□ 0.1
UBA52P62987 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
UBA52P62987 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBA52P62987 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
UBA52P62987 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBA52P62987 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
UBA52P62987 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBA52P62987 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBA52P62987 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBA52P62987 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC15.65■□□□□ 0.1
UBA52P62987 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.65■□□□□ 0.1
UBA52P62987 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBA52P62987 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBA52P62987 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
UBA52P62987 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.65■□□□□ 0.1
UBA52P62987 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.65■□□□□ 0.1
UBA52P62987 AC022616.7-201ENST00000525383 220 ntBASIC15.65■□□□□ 0.1
UBA52P62987 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.65■□□□□ 0.1
UBA52P62987 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.65■□□□□ 0.1
UBA52P62987 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
UBA52P62987 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
UBA52P62987 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.65■□□□□ 0.1
UBA52P62987 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
UBA52P62987 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBA52P62987 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.65■□□□□ 0.1
UBA52P62987 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBA52P62987 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBA52P62987 AD000864.1-201ENST00000624076 2295 ntBASIC15.65■□□□□ 0.1
UBA52P62987 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
UBA52P62987 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
UBA52P62987 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
UBA52P62987 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBA52P62987 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBA52P62987 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
UBA52P62987 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.65■□□□□ 0.1
UBA52P62987 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.65■□□□□ 0.1
UBA52P62987 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
UBA52P62987 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBA52P62987 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBA52P62987 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBA52P62987 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBA52P62987 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBA52P62987 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBA52P62987 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UBA52P62987 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
UBA52P62987 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC15.64■□□□□ 0.09
UBA52P62987 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBA52P62987 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBA52P62987 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBA52P62987 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.64■□□□□ 0.09
UBA52P62987 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UBA52P62987 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBA52P62987 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UBA52P62987 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms