Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.92■□□□□ 0.46
CDKN2DP55273 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKN2DP55273 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKN2DP55273 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDKN2DP55273 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDKN2DP55273 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CDKN2DP55273 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.92■□□□□ 0.46
CDKN2DP55273 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CDKN2DP55273 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.92■□□□□ 0.46
CDKN2DP55273 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDKN2DP55273 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDKN2DP55273 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CDKN2DP55273 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.91■□□□□ 0.46
CDKN2DP55273 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CDKN2DP55273 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
CDKN2DP55273 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.91■□□□□ 0.46
CDKN2DP55273 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKN2DP55273 LINC00167-201ENST00000530583 1419 ntBASIC17.91■□□□□ 0.46
CDKN2DP55273 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKN2DP55273 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDKN2DP55273 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKN2DP55273 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDKN2DP55273 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKN2DP55273 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.91■□□□□ 0.46
CDKN2DP55273 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKN2DP55273 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKN2DP55273 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.91■□□□□ 0.46
CDKN2DP55273 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDKN2DP55273 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.91■□□□□ 0.46
CDKN2DP55273 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.91■□□□□ 0.46
CDKN2DP55273 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
CDKN2DP55273 AC100803.2-201ENST00000562459 1963 ntBASIC17.91■□□□□ 0.46
CDKN2DP55273 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CDKN2DP55273 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CDKN2DP55273 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDKN2DP55273 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDKN2DP55273 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKN2DP55273 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKN2DP55273 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKN2DP55273 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CDKN2DP55273 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKN2DP55273 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CDKN2DP55273 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CDKN2DP55273 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDKN2DP55273 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKN2DP55273 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
CDKN2DP55273 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.9■□□□□ 0.46
CDKN2DP55273 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CDKN2DP55273 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKN2DP55273 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDKN2DP55273 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.9■□□□□ 0.46
CDKN2DP55273 AL441883.1-201ENST00000566170 1045 ntBASIC17.9■□□□□ 0.46
CDKN2DP55273 AC073912.3-201ENST00000624414 853 ntBASIC17.9■□□□□ 0.46
CDKN2DP55273 AC097493.4-201ENST00000641197 219 ntBASIC17.9■□□□□ 0.46
CDKN2DP55273 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKN2DP55273 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.9■□□□□ 0.46
CDKN2DP55273 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKN2DP55273 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CDKN2DP55273 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKN2DP55273 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
CDKN2DP55273 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKN2DP55273 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDKN2DP55273 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDKN2DP55273 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKN2DP55273 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKN2DP55273 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.9■□□□□ 0.46
CDKN2DP55273 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.89■□□□□ 0.46
CDKN2DP55273 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CDKN2DP55273 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CDKN2DP55273 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.89■□□□□ 0.46
CDKN2DP55273 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.89■□□□□ 0.46
CDKN2DP55273 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.89■□□□□ 0.46
CDKN2DP55273 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CDKN2DP55273 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CDKN2DP55273 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDKN2DP55273 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDKN2DP55273 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDKN2DP55273 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CDKN2DP55273 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDKN2DP55273 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CDKN2DP55273 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.89■□□□□ 0.45
CDKN2DP55273 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDKN2DP55273 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.89■□□□□ 0.45
CDKN2DP55273 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.89■□□□□ 0.45
CDKN2DP55273 DUTP2-201ENST00000519164 463 ntBASIC17.89■□□□□ 0.45
CDKN2DP55273 AC079602.3-201ENST00000623931 403 ntBASIC17.89■□□□□ 0.45
CDKN2DP55273 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDKN2DP55273 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDKN2DP55273 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.89■□□□□ 0.45
CDKN2DP55273 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CDKN2DP55273 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDKN2DP55273 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDKN2DP55273 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDKN2DP55273 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.89■□□□□ 0.45
CDKN2DP55273 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDKN2DP55273 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDKN2DP55273 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CDKN2DP55273 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDKN2DP55273 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.88■□□□□ 0.45
CDKN2DP55273 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms