Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.36■□□□□ 0.69
RAD23BP54727 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAD23BP54727 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RAD23BP54727 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAD23BP54727 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAD23BP54727 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAD23BP54727 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAD23BP54727 AC113404.2-201ENST00000507884 177 ntBASIC19.36■□□□□ 0.69
RAD23BP54727 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.36■□□□□ 0.69
RAD23BP54727 RNF126P1-202ENST00000569893 925 ntBASIC19.36■□□□□ 0.69
RAD23BP54727 AC008687.5-201ENST00000593746 558 ntBASIC19.36■□□□□ 0.69
RAD23BP54727 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAD23BP54727 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.36■□□□□ 0.69
RAD23BP54727 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAD23BP54727 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.36■□□□□ 0.69
RAD23BP54727 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.36■□□□□ 0.69
RAD23BP54727 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
RAD23BP54727 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.35■□□□□ 0.69
RAD23BP54727 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.35■□□□□ 0.69
RAD23BP54727 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.35■□□□□ 0.69
RAD23BP54727 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAD23BP54727 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAD23BP54727 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAD23BP54727 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAD23BP54727 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAD23BP54727 AC005332.1-201ENST00000577698 1310 ntBASIC19.35■□□□□ 0.69
RAD23BP54727 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.35■□□□□ 0.69
RAD23BP54727 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.35■□□□□ 0.69
RAD23BP54727 AL645929.1-201ENST00000420084 975 ntBASIC19.35■□□□□ 0.69
RAD23BP54727 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.35■□□□□ 0.69
RAD23BP54727 AP003733.1-201ENST00000491725 852 ntBASIC19.35■□□□□ 0.69
RAD23BP54727 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.35■□□□□ 0.69
RAD23BP54727 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.35■□□□□ 0.69
RAD23BP54727 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.35■□□□□ 0.69
RAD23BP54727 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAD23BP54727 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RAD23BP54727 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
RAD23BP54727 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAD23BP54727 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAD23BP54727 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAD23BP54727 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAD23BP54727 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAD23BP54727 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAD23BP54727 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAD23BP54727 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAD23BP54727 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RAD23BP54727 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAD23BP54727 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAD23BP54727 LINC00167-201ENST00000530583 1419 ntBASIC19.34■□□□□ 0.69
RAD23BP54727 REXO1L9P-201ENST00000604264 2108 ntBASIC19.34■□□□□ 0.69
RAD23BP54727 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAD23BP54727 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.34■□□□□ 0.69
RAD23BP54727 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
RAD23BP54727 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.34■□□□□ 0.69
RAD23BP54727 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.34■□□□□ 0.69
RAD23BP54727 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAD23BP54727 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAD23BP54727 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
RAD23BP54727 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAD23BP54727 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RAD23BP54727 IGHGP-201ENST00000390555 1178 ntBASIC19.34■□□□□ 0.69
RAD23BP54727 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.34■□□□□ 0.69
RAD23BP54727 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAD23BP54727 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAD23BP54727 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAD23BP54727 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAD23BP54727 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.34■□□□□ 0.69
RAD23BP54727 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.34■□□□□ 0.69
RAD23BP54727 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.34■□□□□ 0.69
RAD23BP54727 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.34■□□□□ 0.69
RAD23BP54727 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.34■□□□□ 0.69
RAD23BP54727 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.34■□□□□ 0.69
RAD23BP54727 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAD23BP54727 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAD23BP54727 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAD23BP54727 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.34■□□□□ 0.69
RAD23BP54727 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAD23BP54727 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAD23BP54727 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAD23BP54727 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAD23BP54727 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAD23BP54727 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAD23BP54727 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.34■□□□□ 0.69
RAD23BP54727 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAD23BP54727 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAD23BP54727 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAD23BP54727 AC132938.6-201ENST00000623828 1655 ntBASIC19.33■□□□□ 0.69
RAD23BP54727 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAD23BP54727 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.33■□□□□ 0.69
RAD23BP54727 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.33■□□□□ 0.69
RAD23BP54727 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAD23BP54727 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RAD23BP54727 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
RAD23BP54727 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAD23BP54727 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.33■□□□□ 0.69
RAD23BP54727 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.33■□□□□ 0.69
RAD23BP54727 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAD23BP54727 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.33■□□□□ 0.69
RAD23BP54727 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAD23BP54727 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms