Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PMS1P54277 AC092865.7-201ENST00000641832 219 ntBASIC19.95■□□□□ 0.78
PMS1P54277 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
PMS1P54277 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.95■□□□□ 0.78
PMS1P54277 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
PMS1P54277 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PMS1P54277 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PMS1P54277 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
PMS1P54277 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.95■□□□□ 0.78
PMS1P54277 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
PMS1P54277 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PMS1P54277 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
PMS1P54277 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PMS1P54277 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PMS1P54277 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.94■□□□□ 0.78
PMS1P54277 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PMS1P54277 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.94■□□□□ 0.78
PMS1P54277 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PMS1P54277 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
PMS1P54277 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
PMS1P54277 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PMS1P54277 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PMS1P54277 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PMS1P54277 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PMS1P54277 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PMS1P54277 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.94■□□□□ 0.78
PMS1P54277 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PMS1P54277 PVRIG2P-201ENST00000435460 978 ntBASIC19.94■□□□□ 0.78
PMS1P54277 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.94■□□□□ 0.78
PMS1P54277 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.94■□□□□ 0.78
PMS1P54277 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.94■□□□□ 0.78
PMS1P54277 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.94■□□□□ 0.78
PMS1P54277 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
PMS1P54277 AC012306.2-201ENST00000609350 630 ntBASIC19.94■□□□□ 0.78
PMS1P54277 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.94■□□□□ 0.78
PMS1P54277 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PMS1P54277 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PMS1P54277 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PMS1P54277 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PMS1P54277 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.94■□□□□ 0.78
PMS1P54277 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PMS1P54277 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PMS1P54277 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PMS1P54277 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PMS1P54277 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PMS1P54277 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PMS1P54277 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
PMS1P54277 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PMS1P54277 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.93■□□□□ 0.78
PMS1P54277 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.93■□□□□ 0.78
PMS1P54277 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
PMS1P54277 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.93■□□□□ 0.78
PMS1P54277 DUTP2-201ENST00000519164 463 ntBASIC19.93■□□□□ 0.78
PMS1P54277 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.93■□□□□ 0.78
PMS1P54277 AC079602.3-201ENST00000623931 403 ntBASIC19.93■□□□□ 0.78
PMS1P54277 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
PMS1P54277 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PMS1P54277 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
PMS1P54277 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.78
PMS1P54277 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
PMS1P54277 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
PMS1P54277 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PMS1P54277 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.93■□□□□ 0.78
PMS1P54277 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PMS1P54277 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PMS1P54277 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.92■□□□□ 0.78
PMS1P54277 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PMS1P54277 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PMS1P54277 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PMS1P54277 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PMS1P54277 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PMS1P54277 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PMS1P54277 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.92■□□□□ 0.78
PMS1P54277 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PMS1P54277 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PMS1P54277 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PMS1P54277 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.92■□□□□ 0.78
PMS1P54277 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
PMS1P54277 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PMS1P54277 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PMS1P54277 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.92■□□□□ 0.78
PMS1P54277 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PMS1P54277 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.92■□□□□ 0.78
PMS1P54277 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
PMS1P54277 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PMS1P54277 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PMS1P54277 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PMS1P54277 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PMS1P54277 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
PMS1P54277 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PMS1P54277 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.91■□□□□ 0.78
PMS1P54277 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.91■□□□□ 0.78
PMS1P54277 AL441883.1-201ENST00000566170 1045 ntBASIC19.91■□□□□ 0.78
PMS1P54277 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.91■□□□□ 0.78
PMS1P54277 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.91■□□□□ 0.78
PMS1P54277 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PMS1P54277 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PMS1P54277 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.91■□□□□ 0.78
PMS1P54277 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
PMS1P54277 LINC00602-201ENST00000629776 2065 ntBASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms